Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 4.4e-261 904.0 448 100.0
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 2.1e-141 506.5 446 60.3
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.7e-141 506.1 457 59.3
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.3e-139 499.2 467 58.2
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.6e-138 496.9 491 56.2
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 5.4e-134 481.9 467 57.4
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 2.7e-133 479.6 468 57.3
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 5.1e-132 475.3 467 57.6
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 7.3e-131 471.5 468 55.1
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.8e-127 459.1 468 54.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 4.9e-127 458.8 480 53.5
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 6.0e-125 451.8 473 55.8
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.8e-124 450.3 506 51.6
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.5e-123 447.2 465 52.9
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.8e-122 442.2 497 51.5
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.4e-121 440.7 461 52.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.8e-121 440.3 453 54.1
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.5e-120 437.2 451 54.8
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 9.9e-120 434.5 463 52.3
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.6e-114 417.2 463 49.7
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.4e-113 414.1 472 49.8
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 3.1e-113 412.9 452 51.8
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 5.3e-113 412.1 468 51.5
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 3.4e-112 409.5 466 50.2
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 4.5e-112 409.1 469 49.7
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 4.2e-110 402.5 368 57.6
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 4.6e-109 399.1 482 48.8
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 3.9e-108 396.0 460 49.1
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.5e-107 393.3 466 48.9
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.5e-104 384.0 470 47.2
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.3e-103 380.9 468 47.6
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.0e-103 379.0 459 47.1
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 6.5e-103 378.6 468 47.4
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 8.5e-103 378.3 460 47.6
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.9e-102 377.1 350 58.3
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.5e-102 376.7 468 45.3
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 5.5e-102 375.6 461 47.3
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 7.2e-102 375.2 459 47.3
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.6e-101 374.0 459 47.9
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 2.7e-101 373.2 469 47.5
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 4.6e-101 372.5 468 45.9
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 7.9e-101 371.7 469 46.3
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 5.1e-100 369.0 452 47.1
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 2.5e-99 366.7 458 45.9
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 3.3e-99 366.3 482 46.7
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 4.3e-99 365.9 466 46.4
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 3.1e-97 359.8 369 55.3
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 3.4e-96 356.3 486 45.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.0e-95 354.8 496 44.4
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.7e-95 354.0 333 55.3
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 3.2e-94 349.7 330 57.9
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 9.4e-94 348.2 464 45.0
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.5e-91 340.9 483 45.1
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 4.8e-90 335.9 497 42.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 8.2e-90 335.1 492 41.5
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.4e-89 334.3 479 45.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 5.0e-87 325.9 472 43.4
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 4.2e-86 322.8 468 43.8
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 5.5e-86 322.4 469 41.4
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.2e-85 321.2 333 53.2
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 5.2e-84 315.8 480 41.5
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 4.4e-83 312.8 334 51.5
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 7.4e-83 312.0 467 42.8
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.3e-82 311.2 525 38.9
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 7.7e-80 302.0 490 40.4
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 5.5e-78 295.8 460 42.6
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 8.0e-77 292.0 469 41.8
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 7.7e-72 275.4 354 44.9
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.0e-71 275.0 422 41.7
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 8.5e-71 271.9 338 46.4
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 8.5e-71 271.9 420 41.4
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.7e-69 266.9 325 48.0
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 8.0e-69 265.4 476 39.5
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.5e-67 261.2 383 41.3
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 9.8e-67 258.5 461 38.0
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 3.7e-66 256.5 470 37.7
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 4.1e-57 226.5 384 39.1
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 3.5e-56 223.4 433 36.0
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 9.8e-51 205.3 210 53.8
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 2.5e-46 190.7 238 43.3
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 4.9e-42 176.4 236 43.2
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 7.8e-40 169.1 336 36.0
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 8.6e-39 165.6 206 46.6
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 1.1e-38 165.2 133 63.2
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 3.3e-38 163.7 243 40.3
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 3.1e-36 157.1 305 36.1
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 5.2e-36 156.4 187 46.5
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.2e-32 145.2 125 58.4
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 7.8e-32 142.5 125 60.8
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.0e-31 140.6 121 60.3
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 1.2e-29 135.2 138 53.6
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 2.8e-29 134.0 179 41.3
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 3.6e-29 133.7 125 56.8
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 1.5e-27 128.3 107 61.7
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.7e-26 124.8 179 40.8
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 3.8e-26 123.6 108 60.2
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.1e-25 122.1 134 47.0
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.2e-24 118.6 91 65.9
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.3e-23 115.2 112 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 2.6e-19 100.9 461 24.9
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.1e-16 91.3 92 53.3
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 3.5e-16 90.5 427 25.5
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 3.0e-15 87.4 125 37.6
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 1.1e-14 85.5 64 62.5
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 3.3e-14 84.0 474 21.3
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 5.6e-14 83.2 118 39.0
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 4.8e-13 80.1 67 56.7
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 4.0e-12 77.0 93 47.3
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 1.5e-11 75.1 57 61.4
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 7.6e-11 72.8 291 25.4
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 7.6e-11 72.8 407 22.9
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.3e-10 72.0 58 58.6
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.3e-10 72.0 61 62.3
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 2.4e-09 67.8 220 24.1
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.4e-09 67.8 62 54.8
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 5.1e-07 60.1 162 28.4
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 3.3e-06 57.4 125 34.4


User provided reference genes

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