Gene: PGR119G0202
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR119G0202
- Transcript Identifier PGR119G0202.01
- Gene Type Coding gene
- Location NC_045132.1 : 22519944-22523773 : positive
Gene Family Information
- ID HOM05D006564
- #Genes/#Species 122/89
- Phylogenetic origin
- ID ORTHO05D007772
- #Genes/#Species 127/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031401562.1
- name LOC116211355
- name XM_031545702.1
- id gene-LOC116211355
- uniprot A0A6P8DVQ9
Descriptions
- product type 2 DNA topoisomerase 6 subunit B-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042138 | IEA | GOA Database | meiotic DNA double-strand break formation | |
| GO:0042138 | IEA | InterPro | meiotic DNA double-strand break formation | |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | AT1G60460 |
| GO:0065003 | ISO | PLAZA Integrative Orthology | protein-containing complex assembly | AT1G60460 |
| GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT1G60460 |
| GO:0048314 | ISO | PLAZA Integrative Orthology | embryo sac morphogenesis | AT1G60460 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G60460 |
| GO:0003918 | ISO | PLAZA Integrative Orthology | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | AT1G60460 |
| GO:0030674 | ISO | PLAZA Integrative Orthology | protein-macromolecule adaptor activity | AT1G60460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000793 | ISO | PLAZA Integrative Orthology | condensed chromosome | AT1G60460 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G60460 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G60460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034566 | Type 2 DNA topoisomerase 6 subunit B-like, plants |
| Mapman id | Description |
|---|---|
| 13.3.5.2.1.2 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component b/MTOP6b |