Gene: Solyc06g065620.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065620.2
  • Transcript Identifier Solyc06g065620.2.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38632412-38641350 : positive

Gene Family Information

  • ID HOM05D006564
  • #Genes/#Species 122/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065620.2.1
  • uniprot A0A3Q7GWS9
  • gene_id Solyc06g065620

Descriptions

  • Description Type 2 dna topoisomerase 6 subunit b-like protein (AHRD V3.3 *** A0A314LA60_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006470
IBA
GOA Databaseprotein dephosphorylation
GO:0048314
ISO
PLAZA Integrative Orthologyembryo sac morphogenesis AT1G60460
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT1G60460
GO:0065003
ISO
PLAZA Integrative Orthologyprotein-containing complex assembly AT1G60460
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT1G60460
GO:0042138
IEA
GOA Databasemeiotic DNA double-strand break formation
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030674
ISO
PLAZA Integrative Orthologyprotein-macromolecule adaptor activity AT1G60460
GO:0003918
ISO
PLAZA Integrative OrthologyDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity AT1G60460
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G60460
GO:0016791
IEA
GOA Databasephosphatase activity
GO:0043169
IEA
GOA Databasecation binding
GO:0004721
IEA
GOA Databasephosphoprotein phosphatase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004722
IEA
GOA Databaseprotein serine/threonine phosphatase activity
GO:0106307
IEA
GOA Databaseprotein threonine phosphatase activity
GO:0106306
IEA
GOA Databaseprotein serine phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G60460
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G60460
GO:0000793
ISO
PLAZA Integrative Orthologycondensed chromosome AT1G60460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034566 Type 2 DNA topoisomerase 6 subunit B-like, plants
Mapman id Description
13.3.5.2.1.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component b/MTOP6b