Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI60G1453 Tripterygium wilfordii HOM05D000001 ORTHO05D413962 1.8e-44 182.2 89 100.0
TWI60G1389 Tripterygium wilfordii HOM05D000001 ORTHO05D009494 1.2e-11 73.2 59 69.5
Aa31LG8G8710 Aethionema arabicum HOM05D000001 ORTHO05D009494 1.1e-09 66.6 53 67.9
Thhalv10020073m.g Eutrema salsugineum HOM05D000001 ORTHO05D009494 2.4e-09 65.5 53 67.9
Sp3g19960 Schrenkiella parvula HOM05D000001 ORTHO05D009494 2.4e-09 65.5 53 67.9
AL3G36340 Arabidopsis lyrata HOM05D000001 ORTHO05D009494 3.1e-09 65.1 53 66.0
Carub.0003s2232 Capsella rubella HOM05D000001 ORTHO05D009494 4.1e-09 64.7 53 64.2
CARHR098020 Cardamine hirsuta HOM05D000001 ORTHO05D009494 4.1e-09 64.7 53 66.0
RcHm_v2.0_Chr2g0153281 Rosa chinensis HOM05D000001 ORTHO05D009494 9.2e-09 63.5 53 64.2
AT3G22150 Arabidopsis thaliana HOM05D000001 ORTHO05D009494 1.2e-08 63.2 53 64.2
BraA05t21544Z Brassica rapa HOM05D000001 ORTHO05D009494 1.2e-08 63.2 53 66.0
Eucgr.K01351 Eucalyptus grandis HOM05D000001 ORTHO05D009494 1.2e-08 63.2 49 69.4
Atru.BG.220.p Acer truncatum HOM05D000001 ORTHO05D009494 1.6e-08 62.8 53 60.4
Haze_13549 Corylus avellana HOM05D000001 ORTHO05D009494 1.6e-08 62.8 53 64.2
Sed0019947 Sechium edule HOM05D000001 ORTHO05D009494 2.0e-08 62.4 53 58.5
BcaC05g28099 Brassica carinata HOM05D000001 ORTHO05D009494 2.7e-08 62.0 53 64.2
C05p41260 Brassica napus HOM05D000001 ORTHO05D009494 2.7e-08 62.0 53 64.2
BolC5t32868H Brassica oleracea HOM05D000001 ORTHO05D009494 2.7e-08 62.0 53 64.2
CsaV3_4G032500 Cucumis sativus L. HOM05D000001 ORTHO05D009494 2.7e-08 62.0 53 60.4
CANSAT25G2259 Cannabis sativa HOM05D000001 ORTHO05D009494 3.5e-08 61.6 53 60.4
CiPaw.03G110200 Carya illinoinensis HOM05D000001 ORTHO05D009494 3.5e-08 61.6 53 64.2
CiPaw.03G110700 Carya illinoinensis HOM05D000001 ORTHO05D009494 3.5e-08 61.6 53 64.2
Dinv11349 Davidia involucrata HOM05D000100 ORTHO05D009494 3.5e-08 61.6 54 64.8
Duzib133G1443 Durio zibethinus HOM05D000001 ORTHO05D009494 3.5e-08 61.6 53 60.4
Cfa023360 Carpinus fangiana HOM05D000001 ORTHO05D009494 5.9e-08 60.8 52 63.5
Cpa.g.sc8.267 Carica papaya HOM05D000001 ORTHO05D009494 7.8e-08 60.5 53 60.4
MELO3C032516.2 Cucumis melo HOM05D000001 ORTHO05D009494 7.8e-08 60.5 53 58.5
Prupe.3G184500 Prunus persica HOM05D000001 ORTHO05D009494 7.8e-08 60.5 53 60.4
Ciclev10011066m.g Citrus clementina HOM05D000001 ORTHO05D009494 1.0e-07 60.1 53 60.4
EL10Ac6g15338 Beta vulgaris HOM05D000001 ORTHO05D009494 2.3e-07 58.9 57 59.6
Thecc.01G174200 Theobroma cacao HOM05D000001 ORTHO05D009494 2.3e-07 58.9 52 61.5
MD09G1141900 Malus domestica HOM05D000001 ORTHO05D009494 2.9e-07 58.5 53 58.5
QL04p063285 Quercus lobata HOM05D000001 ORTHO05D009494 5.0e-07 57.8 53 60.4
PGR102G2228 Punica granatum HOM05D000001 ORTHO05D009494 8.6e-07 57.0 53 56.6
Hund12760 Selenicereus undatus HOM05D000001 ORTHO05D009494 1.5e-06 56.2 55 60.0
Actinidia03867 Actinidia chinensis HOM05D000001 ORTHO05D009494 1.9e-06 55.8 52 57.7
THA.LOC104808509 Tarenaya hassleriana HOM05D000001 ORTHO05D009494 2.5e-06 55.5 53 60.4
AUR62003543 Chenopodium quinoa HOM05D000001 ORTHO05D009494 3.3e-06 55.1 57 57.9
AUR62017856 Chenopodium quinoa HOM05D000001 ORTHO05D009494 3.3e-06 55.1 57 57.9
COL.COLO4_19982 Corchorus olitorius HOM05D000001 ORTHO05D009494 5.6e-06 54.3 46 58.7
Nitab4.5_0010892g0010 Nicotiana tabacum HOM05D000001 ORTHO05D009494 7.3e-06 53.9 59 55.9


User provided reference genes

Program Settings