Gene: Sp3g19960

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp3g19960
  • Transcript Identifier Sp3g19960.1
  • Gene Type Coding gene
  • Location ch3-1 : 7190438-7192916 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp3g19960.v2.2
  • pacid 45078084

Descriptions

  • Description PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT3G22150
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT3G22150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003867
ISO
PLAZA Integrative Orthology4-aminobutyrate transaminase activity AT3G22150
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G22150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G22150
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G22150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.11 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF13)
16.11.3.3.4.43 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (AEF1)