Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 0.0e+00 1447.2 942 100.0
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 0.0e+00 1119.0 949 83.6
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 0.0e+00 1101.7 956 81.6
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 7.9e-244 847.8 964 63.8
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 3.1e-240 835.9 887 65.7
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 9.7e-234 814.3 973 66.0
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 5.9e-231 805.1 958 59.6
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 8.8e-219 764.6 970 62.6
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 1.5e-218 763.8 955 61.7
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.1e-216 756.1 960 61.6
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 5.4e-216 755.4 953 62.9
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 1.6e-215 753.8 892 60.8
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.6e-215 753.8 956 61.5
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 3.6e-212 742.7 1005 58.3
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 1.8e-211 740.3 894 63.3
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 1.6e-207 727.2 934 62.0
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 6.6e-206 721.8 968 60.3
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 1.5e-205 720.7 834 63.2
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 1.6e-204 717.2 957 53.1
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 1.0e-203 714.5 1073 54.2
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 6.8e-203 711.8 996 56.6
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 6.6e-198 695.3 914 60.1
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 1.5e-197 694.1 992 59.0
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 2.5e-197 693.3 965 60.5
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 3.3e-197 693.0 793 62.9
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 4.3e-197 692.6 988 59.7
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.8e-195 687.2 779 66.9
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.8e-195 687.2 913 60.0
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 1.2e-194 684.5 788 65.2
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.2e-194 684.5 998 57.5
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 1.5e-194 684.1 777 68.2
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 7.5e-194 681.8 776 63.7
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 7.5e-194 681.8 888 61.0
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 1.9e-192 677.2 907 62.3
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 5.4e-192 675.6 887 62.0
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 3.5e-191 672.9 797 61.4
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 1.7e-190 670.6 906 61.5
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 9.5e-189 664.8 905 58.8
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 1.6e-188 664.1 895 54.2
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 3.1e-187 659.8 894 57.0
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 4.0e-187 659.4 932 58.5
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 1.4e-184 651.0 792 61.9
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 4.1e-184 649.4 777 62.4
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 7.1e-184 648.7 776 64.4
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 3.0e-182 643.3 888 57.4
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 6.2e-180 635.6 776 63.7
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 2.3e-179 633.6 958 55.3
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 3.4e-178 629.8 956 55.8
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 2.4e-176 623.6 963 58.0
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 9.2e-176 621.7 776 62.6
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 2.1e-175 620.5 824 56.7
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 1.9e-173 614.0 779 63.5
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 7.3e-173 612.1 976 52.4
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 9.6e-173 611.7 874 58.6
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 3.4e-170 603.2 898 55.5
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 7.6e-170 602.1 794 60.6
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 9.9e-170 601.7 923 54.0
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 1.3e-169 601.3 902 57.8
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 6.4e-169 599.0 987 50.1
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 8.4e-169 598.6 779 61.1
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 2.4e-168 597.0 914 54.0
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 4.6e-167 592.8 838 55.6
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 7.8e-167 592.0 927 50.5
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 7.8e-167 592.0 966 52.8
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 1.0e-166 591.7 890 52.9
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 4.3e-165 586.3 941 55.4
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 5.6e-165 585.9 786 62.0
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 1.4e-163 581.3 791 61.1
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 1.8e-163 580.9 1031 45.5
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 2.4e-163 580.5 937 52.3
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 6.9e-163 578.9 955 54.6
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 3.4e-162 576.6 873 55.9
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 7.6e-162 575.5 975 54.1
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 1.7e-161 574.3 979 55.3
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 8.4e-161 572.0 868 51.7
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 1.1e-160 571.6 1045 47.2
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 2.4e-160 570.5 892 56.2
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 1.2e-159 568.2 968 52.7
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 1.6e-159 567.8 765 60.9
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 1.5e-157 561.2 788 58.1
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 2.5e-157 560.5 831 57.4
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 2.0e-154 550.8 958 51.6
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 6.4e-153 545.8 963 52.2
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 6.4e-153 545.8 856 51.1
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 4.2e-152 543.1 901 51.9
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 5.5e-152 542.7 898 50.3
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 9.3e-152 542.0 975 56.0
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 1.3e-150 538.1 983 52.5
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 3.3e-149 533.5 965 53.5
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 3.7e-148 530.0 904 44.6
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 4.8e-148 529.6 955 51.5
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 4.8e-148 529.6 795 56.4
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 8.2e-148 528.9 965 51.5
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 1.4e-147 528.1 967 50.5
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 5.3e-147 526.2 951 51.5
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 6.9e-147 525.8 953 49.2
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 6.9e-147 525.8 953 49.2
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 3.4e-146 523.5 964 50.9
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 1.0e-145 521.9 967 49.9
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 2.9e-145 520.4 765 52.3
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 1.9e-144 517.7 854 52.5
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.7e-143 513.8 966 49.6
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 1.8e-142 511.1 984 47.6
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 8.7e-142 508.8 860 57.7
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 2.1e-140 504.2 740 51.9
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 6.9e-139 499.2 865 53.2
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 4.5e-138 496.5 780 57.2
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 2.3e-134 484.2 954 50.8
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 9.7e-133 478.8 968 45.2
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 2.4e-131 474.2 946 49.2
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 3.8e-129 466.8 829 45.0
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 1.1e-125 455.3 788 50.9
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 2.0e-125 454.5 892 46.1
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 3.7e-124 450.3 920 47.9
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 1.7e-116 424.9 963 47.8
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 6.5e-105 386.3 934 45.9
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 8.0e-103 379.4 849 49.2
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 7.0e-99 366.3 777 50.1
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 3.5e-98 364.0 750 47.3
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 1.6e-95 355.1 691 45.6
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.2e-93 349.0 854 45.7
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 1.2e-87 328.9 577 54.9
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.8e-83 315.1 283 62.2
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 2.7e-82 311.2 325 60.0
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 1.6e-79 302.0 305 55.7
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.2e-75 287.7 269 59.5
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 1.1e-67 262.7 425 45.6
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 6.0e-66 256.9 441 47.4
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 3.4e-61 241.1 842 37.5
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 3.2e-59 234.6 227 66.5
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 5.4e-59 233.8 510 38.8
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 3.5e-58 231.1 246 54.5
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 6.9e-46 190.3 320 46.9
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 9.6e-40 169.9 130 65.4
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 2.6e-37 161.8 96 82.3
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 3.0e-25 121.7 71 84.5
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 8.7e-25 120.2 135 45.9
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 6.9e-22 110.5 72 77.8
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.4e-19 102.8 134 45.5
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 9.4e-19 100.1 178 39.9
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 4.6e-18 97.8 191 35.6
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 1.3e-15 89.7 132 37.1
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 2.0e-13 82.4 107 43.0
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 2.6e-13 82.0 92 52.2
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 5.9e-13 80.9 76 55.3
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 3.8e-12 78.2 146 34.9
ECA247G0578 Erigeron canadensis HOM05D004873 ORTHO05D006122 1.9e-11 75.9 118 44.1
FAN22G0459 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.9e-09 68.2 83 51.8
PSO339G4348 Papaver somniferum HOM05D031134 ORTHO05D302392 1.5e-08 66.2 189 29.1
PSO339G1828 Papaver somniferum HOM05D031134 ORTHO05D301998 2.0e-08 65.9 189 28.6
PSO339G5906 Papaver somniferum HOM05D031134 ORTHO05D302295 2.0e-08 65.9 189 28.6
Lalb_Chr05g0228141 Lupinus albus HOM05D004873 ORTHO05D238147 2.4e-06 58.9 112 43.8
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 7.0e-06 57.4 92 44.6


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