Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI18G0218 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 8.2e-82 307.0 154 100.0
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 4.9e-66 254.6 140 91.4
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 3.2e-57 225.3 141 78.0
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 3.5e-56 221.9 141 78.7
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 8.6e-55 217.2 141 78.7
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 2.5e-54 215.7 141 76.6
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 2.5e-54 215.7 141 76.6
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 1.6e-53 213.0 141 73.8
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 8.0e-53 210.7 141 75.2
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 1.0e-52 210.3 140 75.7
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 1.4e-52 209.9 141 73.0
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.4e-52 209.9 141 73.0
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 1.8e-52 209.5 141 73.0
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 5.2e-52 208.0 141 75.2
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 5.2e-52 208.0 141 73.8
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 8.9e-52 207.2 141 72.3
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 1.5e-51 206.5 141 73.0
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 2.0e-51 206.1 141 73.0
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 5.8e-51 204.5 141 71.6
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 7.5e-51 204.1 141 72.3
vmacro15104 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 1.3e-50 203.4 140 72.1
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 2.9e-50 202.2 141 70.9
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 4.9e-50 201.4 141 71.6
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 4.9e-50 201.4 141 71.6
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 4.9e-50 201.4 141 71.6
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 8.3e-50 200.7 141 69.5
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 1.1e-49 200.3 141 69.5
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 1.9e-49 199.5 142 72.5
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 2.4e-49 199.1 140 70.0
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 3.2e-49 198.7 140 67.9
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 7.0e-49 197.6 140 70.7
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 9.2e-49 197.2 141 70.9
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 9.2e-49 197.2 141 71.6
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 1.2e-48 196.8 141 68.8
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 2.0e-48 196.1 140 70.0
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 1.3e-47 193.4 141 66.0
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 1.3e-47 193.4 140 68.6
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 3.0e-47 192.2 140 68.6
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 6.6e-47 191.0 140 67.1
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 6.6e-47 191.0 141 68.8
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 8.6e-47 190.7 140 67.9
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 1.1e-46 190.3 140 65.7
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 1.1e-46 190.3 141 68.8
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 1.9e-46 189.5 140 67.1
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 1.9e-46 189.5 140 67.1
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 1.9e-46 189.5 141 68.1
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 1.9e-46 189.5 140 65.0
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 2.5e-46 189.1 140 66.4
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 3.3e-46 188.7 140 66.4
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 3.3e-46 188.7 140 66.4
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 5.6e-46 188.0 126 73.0
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 5.6e-46 188.0 134 70.9
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 5.6e-46 188.0 134 70.9
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 9.5e-46 187.2 140 64.3
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 9.5e-46 187.2 141 61.0
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 1.2e-45 186.8 132 66.7
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 1.2e-45 186.8 140 66.4
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 1.2e-45 186.8 140 66.4
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 1.6e-45 186.4 134 72.4
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 2.1e-45 186.0 140 65.7
Oeu031896.1 Olea europaea HOM05D005254 ORTHO05D007557 2.8e-45 185.7 140 65.7
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 8.1e-45 184.1 140 65.0
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 8.1e-45 184.1 131 71.0
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 8.1e-45 184.1 140 66.4
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 1.1e-44 183.7 141 66.0
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 1.4e-44 183.3 141 61.7
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 1.8e-44 183.0 141 61.7
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 1.8e-44 183.0 132 69.7
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 3.1e-44 182.2 140 65.0
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 3.1e-44 182.2 136 64.0
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 3.1e-44 182.2 140 66.4
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 4.0e-44 181.8 135 64.4
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 5.2e-44 181.4 135 63.7
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 6.8e-44 181.0 140 61.4
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 6.8e-44 181.0 136 64.0
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 6.8e-44 181.0 133 63.2
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 8.9e-44 180.6 139 61.2
Os01g0300600 Oryza sativa ssp. japonica HOM05D005254 ORTHO05D007557 3.4e-43 178.7 139 61.2
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 3.4e-43 178.7 135 62.2
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 4.4e-43 178.3 134 62.7
LjContig00310g0001105 Lotus japonicus HOM05D005254 ORTHO05D007557 4.4e-43 178.3 133 63.2
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 5.8e-43 177.9 135 61.5
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 7.5e-43 177.6 135 60.7
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 9.8e-43 177.2 140 63.6
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 1.3e-42 176.8 135 61.5
Lj1A15G51 Lonicera japonica HOM05D005254 ORTHO05D007557 1.7e-42 176.4 119 72.3
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 2.9e-42 175.6 141 61.7
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 3.7e-42 175.3 139 61.9
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 3.7e-42 175.3 131 67.9
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 6.4e-42 174.5 141 63.8
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 6.4e-42 174.5 140 60.0
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 8.3e-42 174.1 134 62.7
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 1.1e-41 173.7 139 60.4
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 1.1e-41 173.7 139 60.4
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 2.4e-41 172.6 141 63.8
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 1.2e-40 170.2 139 64.0
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 2.1e-40 169.5 140 60.7
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 4.6e-40 168.3 140 59.3
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 1.7e-39 166.4 131 61.8
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 6.6e-39 164.5 140 59.3
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 1.9e-38 162.9 140 56.4
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 1.2e-37 160.2 140 55.7
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 2.0e-35 152.9 130 56.9
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 4.4e-35 151.8 141 52.5
BcaC08g45196 Brassica carinata HOM05D005254 ORTHO05D007557 7.6e-35 151.0 139 60.4
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 1.7e-34 149.8 132 52.3
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 1.1e-33 147.1 130 57.7
BolC6t37991H Brassica oleracea HOM05D005254 ORTHO05D007557 1.5e-27 126.7 95 67.4
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 1.3e-23 113.6 140 48.6
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 1.7e-23 113.2 141 41.8
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 9.6e-22 107.5 131 38.2
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 3.6e-21 105.5 141 37.6
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 1.8e-20 103.2 133 36.8
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 2.4e-17 92.8 140 37.9
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 1.3e-13 80.5 57 64.9
EL10Ac4g10003 Beta vulgaris HOM05D005254 ORTHO05D007557 1.1e-12 77.4 64 60.9
FAN23G1589 Fragaria x ananassa HOM05D005254 ORTHO05D007557 6.0e-08 61.6 43 67.4


User provided reference genes

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