Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.6e-175 618.2 333 100.0
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 5.3e-134 481.5 334 72.8
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 8.7e-129 464.2 338 69.8
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 6.2e-127 458.0 333 69.4
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.0e-121 440.7 333 66.4
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.3e-119 433.7 329 65.7
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 3.1e-118 429.1 329 66.3
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 3.8e-116 422.2 329 66.0
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 3.0e-113 412.5 329 63.2
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 3.9e-113 412.1 329 63.2
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.0e-109 399.8 333 61.6
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.9e-107 393.3 333 60.7
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.2e-106 390.6 336 61.0
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.1e-106 389.8 330 61.5
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 3.6e-106 389.0 334 59.0
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.7e-106 388.7 334 60.2
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 7.9e-106 387.9 333 59.8
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 7.9e-106 387.9 334 59.9
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 2.6e-104 382.9 334 59.3
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 7.4e-104 381.3 335 60.6
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 7.4e-104 381.3 331 58.6
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.7e-103 380.2 336 57.4
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 2.2e-103 379.8 356 55.9
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 2.8e-103 379.4 329 59.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.4e-102 377.1 331 58.6
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 9.1e-102 374.4 326 58.6
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.2e-101 374.0 333 58.9
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 1.5e-101 373.6 335 57.0
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 2.0e-101 373.2 335 56.7
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 2.6e-101 372.9 336 58.9
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 3.5e-101 372.5 330 59.1
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 7.7e-101 371.3 336 58.6
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.0e-100 370.9 336 57.7
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.7e-100 370.2 337 57.6
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 1.7e-100 370.2 330 58.8
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 1.7e-100 370.2 336 54.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.9e-100 369.4 336 57.7
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 1.4e-99 367.1 333 57.7
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.4e-99 367.1 336 56.8
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.9e-99 366.7 332 57.2
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.2e-99 365.5 378 52.9
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 4.2e-99 365.5 331 56.2
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 7.2e-99 364.8 336 56.0
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 7.2e-99 364.8 336 57.4
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 9.4e-99 364.4 331 58.6
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 9.4e-99 364.4 336 57.1
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 2.7e-98 362.8 331 56.5
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 3.6e-98 362.5 337 55.2
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.4e-97 360.5 333 55.0
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 1.8e-97 360.1 330 56.4
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 3.0e-97 359.4 334 57.2
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 8.8e-97 357.8 337 54.9
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 2.0e-96 356.7 330 58.2
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 2.0e-96 356.7 332 54.5
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.6e-96 356.3 335 55.5
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 3.3e-96 355.9 346 53.2
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 3.3e-96 355.9 331 55.0
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 8.2e-95 351.3 330 55.8
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 1.4e-94 350.5 326 56.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 1.8e-94 350.1 331 54.7
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.8e-94 350.1 331 53.2
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 3.1e-94 349.4 326 57.1
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 5.9e-93 345.1 344 54.4
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 1.0e-92 344.4 330 55.5
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 2.9e-92 342.8 332 55.1
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.9e-91 340.1 333 54.4
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 2.5e-91 339.7 326 54.3
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.0e-89 334.3 331 52.9
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.0e-89 334.3 331 52.9
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 1.5e-88 330.5 333 54.4
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 8.3e-87 324.7 321 57.0
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 3.5e-85 319.3 337 50.7
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 8.0e-82 308.1 324 50.6
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.4e-81 307.4 289 55.7
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 7.5e-80 301.6 335 49.3
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.1e-78 297.7 330 49.7
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 1.6e-77 293.9 336 49.1
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 4.5e-77 292.4 330 47.3
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 1.0e-76 291.2 335 46.6
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 1.0e-76 291.2 352 46.0
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.3e-76 290.8 337 46.0
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 2.9e-76 289.7 330 47.3
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 2.9e-76 289.7 330 47.3
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 3.8e-76 289.3 333 47.1
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 1.1e-75 287.7 330 46.7
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 4.2e-75 285.8 333 46.8
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 3.6e-74 282.7 330 46.7
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 6.1e-74 282.0 333 46.2
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 8.0e-74 281.6 300 51.7
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 2.3e-73 280.0 330 46.1
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.5e-72 277.3 299 49.5
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 1.4e-70 270.8 331 44.7
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 7.8e-69 265.0 330 44.5
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 1.3e-68 264.2 332 44.9
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 1.1e-62 244.6 239 53.1
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 9.2e-62 241.5 242 56.2
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 3.1e-57 226.5 356 40.2
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.5e-56 224.2 271 45.4
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 4.4e-56 222.6 331 40.8
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 3.7e-55 219.5 164 65.2
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 7.3e-51 205.3 348 38.8
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.9e-43 180.6 342 33.6
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 4.3e-43 179.5 464 31.5
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.9e-39 166.8 324 35.2
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 4.2e-38 162.9 165 52.1
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 1.0e-36 158.3 330 32.7
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 8.7e-36 155.2 186 47.8
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 4.8e-34 149.4 185 45.9
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 6.9e-33 145.6 170 45.9
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 2.6e-32 143.7 147 51.7
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.6e-32 142.1 145 50.3
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 7.6e-32 142.1 143 51.0
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 2.5e-27 127.1 150 45.3
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 3.6e-26 123.2 101 59.4
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 4.0e-25 119.8 81 66.7
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 2.0e-16 90.9 73 50.7
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 4.9e-15 86.3 61 54.1
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 6.0e-13 79.3 93 41.9
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 2.5e-11 73.9 57 56.1
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 3.4e-08 63.5 119 38.7
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 7.6e-08 62.4 58 51.7
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 5.0e-07 59.7 55 58.2
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 9.3e-06 55.5 81 40.7


User provided reference genes

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