Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9529 Trifolium pratense HOM05D002702 ORTHO05D003416 1.1e-90 336.7 178 100.0
TPR.G9547 Trifolium pratense HOM05D002702 ORTHO05D003416 5.1e-27 125.2 129 58.9
arahy.Tifrunner.gnm1.ann1.9I2R1K Arachis hypogaea HOM05D002702 ORTHO05D003416 1.0e-22 110.9 127 55.1
Lj4g0005434 Lotus japonicus HOM05D002702 ORTHO05D003416 2.2e-22 109.8 127 54.3
Lj2g0010098 Lotus japonicus HOM05D002702 ORTHO05D003416 5.0e-22 108.6 130 53.1
Ca_08321_v3 Cicer arietinum L. HOM05D002702 ORTHO05D003416 6.5e-22 108.2 125 56.0
arahy.Tifrunner.gnm1.ann1.LW5WEF Arachis hypogaea HOM05D002702 ORTHO05D003416 3.6e-20 102.4 130 51.5
Ca_04466_v3 Cicer arietinum L. HOM05D002702 ORTHO05D003416 1.8e-19 100.1 129 50.4
SGA_v2.0_scaffold17G07984 Striga asiatica HOM05D002702 ORTHO05D003416 1.5e-18 97.1 183 39.3
Glyma.19G117700 Glycine max HOM05D002702 ORTHO05D003416 2.0e-18 96.7 175 43.4
Medtr6g027510 Medicago truncatula HOM05D002702 ORTHO05D003416 2.8e-17 92.8 120 50.8
Glyma.16G035400 Glycine max HOM05D002702 ORTHO05D003416 8.2e-17 91.3 178 40.4
Phvul.001G106433 Phaseolus vulgaris HOM05D002702 ORTHO05D003416 1.4e-16 90.5 129 51.9
Gorai.013G196300 Gossypium raimondii HOM05D002702 ORTHO05D003416 2.4e-16 89.7 128 48.4
Gohir.D13G166200 Gossypium hirsutum HOM05D002702 ORTHO05D003416 5.3e-16 88.6 128 47.7
TWI60G0137 Tripterygium wilfordii HOM05D002702 ORTHO05D003416 6.9e-16 88.2 166 38.6
Medtr7g086730 Medicago truncatula HOM05D002702 ORTHO05D003416 2.0e-15 86.7 165 40.6
Peaxi162Scf00978g00036 Petunia axillaris HOM05D002702 ORTHO05D003416 2.0e-15 86.7 118 50.8
Gohir.A13G160900 Gossypium hirsutum HOM05D002702 ORTHO05D003416 3.4e-15 85.9 127 48.0
Lalb_Chr02g0157411 Lupinus albus HOM05D002702 ORTHO05D003416 2.9e-14 82.8 129 47.3
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 3.8e-14 82.4 107 51.4
Gohir.A11G164500 Gossypium hirsutum HOM05D002702 ORTHO05D003416 6.5e-14 81.6 128 46.1
Gohir.D11G170800 Gossypium hirsutum HOM05D002702 ORTHO05D003416 8.5e-14 81.3 128 46.1
Gorai.007G182800 Gossypium raimondii HOM05D002702 ORTHO05D003416 8.5e-14 81.3 128 46.1
Potri.009G039100 Populus trichocarpa HOM05D002702 ORTHO05D003416 2.5e-13 79.7 121 47.1
GSVIVG01029946001 Vitis vinifera HOM05D002702 ORTHO05D003416 2.5e-13 79.7 122 44.3
VMungo1383G3011 Vigna mungo HOM05D002702 ORTHO05D003416 3.2e-13 79.3 102 54.9
Potri.001G246100 Populus trichocarpa HOM05D002702 ORTHO05D003416 9.4e-13 77.8 162 36.4
Psat5g080560 Pisum sativum HOM05D002702 ORTHO05D003416 1.2e-12 77.4 77 58.4
Nitab4.5_0003719g0060 Nicotiana tabacum HOM05D002702 ORTHO05D003416 1.6e-12 77.0 123 48.0
Psat3g086160 Pisum sativum HOM05D002702 ORTHO05D015070 2.1e-12 76.6 89 51.7
PSO210G0347 Papaver somniferum HOM05D002702 ORTHO05D003416 2.7e-12 76.3 166 38.6
Lj4g0025158 Lotus japonicus HOM05D002702 ORTHO05D003416 4.7e-12 75.5 147 38.8
Migut.K00214 Erythranthe guttata HOM05D002702 ORTHO05D003416 8.0e-12 74.7 129 40.3
TAR636G0479 Trochodendron aralioides HOM05D002702 ORTHO05D003416 8.0e-12 74.7 128 43.8
MELO3C015360.2 Cucumis melo HOM05D002702 ORTHO05D003416 1.0e-11 74.3 125 45.6
Solyc01g088720.3 Solanum lycopersicum HOM05D002702 ORTHO05D003416 1.0e-11 74.3 127 42.5
Sopen01g035560 Solanum pennellii HOM05D002702 ORTHO05D003416 1.0e-11 74.3 127 42.5
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.8e-11 73.6 101 44.6
Lalb_Chr02g0157421 Lupinus albus HOM05D002702 ORTHO05D003416 1.8e-11 73.6 88 52.3
THA.LOC104816256 Tarenaya hassleriana HOM05D002702 ORTHO05D003416 8.8e-11 71.2 126 41.3
Actinidia07964 Actinidia chinensis HOM05D002702 ORTHO05D003416 1.1e-10 70.9 121 43.8
Ciclev10019321m.g Citrus clementina HOM05D002702 ORTHO05D003416 1.1e-10 70.9 128 43.0
PSO832G1528 Papaver somniferum HOM05D002702 ORTHO05D003416 1.1e-10 70.9 109 45.9
RcHm_v2.0_Chr4g0409121 Rosa chinensis HOM05D002702 ORTHO05D003416 2.6e-10 69.7 157 35.0
CAN.G756.30 Capsicum annuum HOM05D002702 ORTHO05D003416 5.7e-10 68.6 127 40.9
CsaV3_1G039340 Cucumis sativus L. HOM05D002702 ORTHO05D003416 5.7e-10 68.6 112 44.6
Aqoxy5G01199 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 7.4e-10 68.2 103 44.7
Psat3g086200 Pisum sativum HOM05D002702 ORTHO05D003416 1.3e-09 67.4 98 48.0
Aqoxy4G00023 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 2.2e-09 66.6 103 43.7
FAN12G2138 Fragaria x ananassa HOM05D002702 ORTHO05D003416 3.7e-09 65.9 186 34.4
FAN12G2960 Fragaria x ananassa HOM05D002702 ORTHO05D003416 3.7e-09 65.9 186 34.4
Aqoxy4G00362 Aquilegia oxysepala HOM05D002702 ORTHO05D003416 6.3e-09 65.1 108 41.7
Sabra16G0149300 Salix brachista HOM05D002702 ORTHO05D003416 6.3e-09 65.1 109 40.4
Atru.chr2.91 Acer truncatum HOM05D002702 ORTHO05D003416 8.2e-09 64.7 97 45.4
FvH4_4g11810 Fragaria vesca HOM05D002702 ORTHO05D003416 1.1e-08 64.3 128 39.8
Psat1g089240 Pisum sativum HOM05D002702 ORTHO05D003416 1.1e-08 64.3 214 31.8
FAN17G2691 Fragaria x ananassa HOM05D002702 ORTHO05D003416 1.4e-08 63.9 150 36.0
Dinv25037 Davidia involucrata HOM05D002702 ORTHO05D003416 1.8e-08 63.5 141 37.6
PGR031G3358 Punica granatum HOM05D002702 ORTHO05D003416 3.1e-08 62.8 121 40.5
ATR0697G089 Amborella trichopoda HOM05D002702 ORTHO05D003416 4.1e-08 62.4 112 37.5
BcaB02g08778 Brassica carinata HOM05D002702 ORTHO05D003416 4.1e-08 62.4 144 34.0
TPR.G34790 Trifolium pratense HOM05D002702 ORTHO05D003416 5.3e-08 62.0 99 43.4
Dinv17311 Davidia involucrata HOM05D002702 ORTHO05D003416 2.0e-07 60.1 122 43.4
C04p09810 Brassica napus HOM05D002702 ORTHO05D003416 2.6e-07 59.7 172 30.8
BolC4t22589H Brassica oleracea HOM05D002702 ORTHO05D003416 2.6e-07 59.7 172 30.8
Aa31LG3G1860 Aethionema arabicum HOM05D002702 ORTHO05D003416 5.9e-07 58.5 123 37.4
Oeu057252.1 Olea europaea HOM05D002702 ORTHO05D003416 5.9e-07 58.5 119 40.3
Carub.0002s1026 Capsella rubella HOM05D002702 ORTHO05D003416 1.0e-06 57.8 157 31.8
Phvul.001G106000 Phaseolus vulgaris HOM05D002702 ORTHO05D003416 1.3e-06 57.4 97 47.4
ClCG03G016660 Citrullus lanatus HOM05D002702 ORTHO05D003416 1.7e-06 57.0 115 39.1
Lj2g0020942 Lotus japonicus HOM05D002702 ORTHO05D003416 1.7e-06 57.0 137 31.4
unitig_748.g8246 Utricularia gibba HOM05D002702 ORTHO05D003416 1.7e-06 57.0 159 31.4
Cc02_g13440 Coffea canephora HOM05D002702 ORTHO05D003416 2.2e-06 56.6 113 41.6
CARHR083720 Cardamine hirsuta HOM05D002702 ORTHO05D003416 3.8e-06 55.8 114 38.6
VMungo1383G3234 Vigna mungo HOM05D002702 ORTHO05D003416 3.8e-06 55.8 97 47.4
RcHm_v2.0_Chr7g0228131 Rosa chinensis HOM05D002702 ORTHO05D003416 8.5e-06 54.7 155 32.3
SHI21361 Sapria himalayana HOM05D002702 ORTHO05D003416 8.5e-06 54.7 120 37.5


User provided reference genes

Program Settings