Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8664 Trifolium pratense HOM05D000216 ORTHO05D003638 3.4e-47 191.4 103 100.0
TPR.G8651 Trifolium pratense HOM05D000216 ORTHO05D003638 3.5e-44 181.4 103 95.1
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-33 146.4 103 80.6
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.2e-33 146.4 103 80.6
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 2.8e-33 145.2 103 79.6
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 3.6e-33 144.8 103 79.6
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 3.6e-33 144.8 103 79.6
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 3.6e-33 144.8 103 79.6
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 8.1e-33 143.7 103 78.6
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.1e-32 143.3 103 78.6
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.1e-32 143.3 103 78.6
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.1e-32 143.3 103 78.6
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.1e-32 143.3 103 78.6
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr00c0560g0575801 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 1.4e-32 142.9 103 78.6
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.8e-32 142.5 103 78.6
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.8e-32 142.5 103 78.6
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.8e-32 142.5 103 78.6
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 2.3e-32 142.1 101 79.2
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.3e-32 142.1 103 77.7
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 78.6
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 77.7
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 6.8e-32 140.6 103 77.7
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 8.9e-32 140.2 103 76.7
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 8.9e-32 140.2 103 78.6
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 1.2e-31 139.8 103 77.7
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 1.2e-31 139.8 103 75.7
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 76.7
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 76.7
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 3.4e-31 138.3 103 76.7
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 4.4e-31 137.9 103 76.7
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 1.3e-30 136.3 101 76.2
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 1.7e-30 136.0 103 74.8
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.2e-30 135.6 103 75.7
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.9e-30 135.2 103 75.7
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 2.4e-29 132.1 97 79.4
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 2.4e-29 132.1 95 80.0
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-29 131.0 97 79.4
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 7.1e-29 130.6 103 73.8
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 3.5e-28 128.3 94 78.7
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.5e-28 128.3 101 74.3
Gohir.D02G093150 Gossypium hirsutum HOM05D000216 ORTHO05D003638 3.0e-27 125.2 103 71.8
CAN.G229.14 Capsicum annuum HOM05D000216 ORTHO05D003638 5.1e-27 124.4 93 77.4
Gorai.006G017100 Gossypium raimondii HOM05D000216 ORTHO05D003638 5.1e-27 124.4 103 68.9
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 5.1e-27 124.4 103 70.9
Migut.L00411 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.9e-26 122.5 92 77.2
Gorai.006G159100 Gossypium raimondii HOM05D000216 ORTHO05D003638 3.3e-26 121.7 98 72.4
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 4.3e-26 121.3 108 67.6
Gohir.D09G014950 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.8e-25 118.6 103 68.0
Nn4g23650 Nelumbo nucifera HOM05D000216 ORTHO05D003638 8.1e-25 117.1 90 77.8
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 1.8e-24 115.9 86 79.1
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 4.0e-24 114.8 86 77.9
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 6.8e-24 114.0 103 65.0
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 8.4e-22 107.1 83 77.1
Medtr6g025340 Medicago truncatula HOM05D000216 ORTHO05D003638 1.1e-21 106.7 100 63.0
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 1.4e-21 106.3 79 77.2
Migut.D01339 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.4e-21 106.3 82 76.8
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 5.4e-21 104.4 93 68.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 5.4e-21 104.4 78 76.9
Gorai.005G029600 Gossypium raimondii HOM05D000216 ORTHO05D003638 6.0e-20 100.9 89 68.5
Gohir.D02G023550 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.3e-19 99.8 89 67.4
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 7.3e-18 94.0 58 89.7
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.6e-17 92.8 93 63.4
Gohir.D04G020733 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.0e-15 85.9 84 63.1
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.6e-15 85.5 87 64.4
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.6e-15 85.5 87 64.4
HanXRQChr13g0425721 Helianthus annuus HOM05D000216 ORTHO05D003638 9.9e-15 83.6 48 89.6
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 9.9e-15 83.6 48 89.6
Phvul.001G151500 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.7e-14 82.8 81 64.2
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-13 78.6 44 88.6
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 4.2e-13 78.2 102 51.0
Migut.C00051 Erythranthe guttata HOM05D000216 ORTHO05D003638 7.1e-13 77.4 49 85.7
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 7.1e-13 77.4 66 72.7
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 1.6e-12 76.3 65 72.3
Gorai.012G024800 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.1e-12 75.9 84 57.1
Nitab4.5_0001140g0200 Nicotiana tabacum HOM05D000216 ORTHO05D003638 2.1e-12 75.9 49 81.6
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 2.1e-12 75.9 68 72.1
PGSC0003DMG403017663 Solanum tuberosum HOM05D000216 ORTHO05D003518 2.7e-12 75.5 65 73.8
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 6.0e-12 74.3 103 44.7
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 1.0e-11 73.6 62 71.0
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.3e-09 66.6 41 80.5
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 2.1e-09 65.9 38 84.2
Nitab4.5_0000559g0180 Nicotiana tabacum HOM05D000216 ORTHO05D028337 2.8e-09 65.5 101 42.6
Potri.019G028601 Populus trichocarpa HOM05D000216 ORTHO05D003638 2.4e-08 62.4 36 80.6
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.4e-08 62.4 54 68.5
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.4e-08 62.4 54 68.5
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.4e-08 62.4 54 68.5
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.4e-08 62.4 54 68.5
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 2.4e-08 62.4 54 68.5
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 6.9e-08 60.8 39 74.4
Eucgr.G00227 Eucalyptus grandis HOM05D000216 ORTHO05D003638 1.2e-07 60.1 67 59.7
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 3.4e-07 58.5 34 82.4
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 5.8e-07 57.8 31 87.1
Glyma.19G054201 Glycine max HOM05D000216 ORTHO05D003638 7.6e-07 57.4 32 90.6
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 7.6e-07 57.4 31 87.1
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 1.7e-06 56.2 32 84.4
Oeu024824.1 Olea europaea HOM05D000216 ORTHO05D003518 2.2e-06 55.8 39 71.8
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 3.8e-06 55.1 31 83.9
Solyc08g028875.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 8.4e-06 53.9 58 60.3


User provided reference genes

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