Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8651 Trifolium pratense HOM05D000216 ORTHO05D003638 5.8e-47 190.7 103 100.0
TPR.G8664 Trifolium pratense HOM05D000216 ORTHO05D003638 7.8e-44 180.3 103 95.1
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 4.0e-32 141.4 103 76.7
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 5.2e-32 141.0 103 76.7
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 5.2e-32 141.0 103 76.7
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 8.9e-32 140.2 101 78.2
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 8.9e-32 140.2 101 78.2
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 8.9e-32 140.2 101 78.2
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 2.0e-31 139.0 101 77.2
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr00c0560g0575801 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 2.0e-31 139.0 103 75.7
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.6e-31 138.7 101 77.2
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.6e-31 138.7 101 77.2
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.6e-31 138.7 101 77.2
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.6e-31 138.7 101 77.2
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 4.4e-31 137.9 101 77.2
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.4e-31 137.9 101 77.2
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 4.4e-31 137.9 101 77.2
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 5.8e-31 137.5 99 77.8
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.8e-31 137.5 101 76.2
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 7.5e-31 137.1 103 74.8
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 7.5e-31 137.1 103 74.8
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 9.9e-31 136.7 103 74.8
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 1.3e-30 136.3 103 73.8
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 1.7e-30 136.0 103 72.8
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 2.2e-30 135.6 103 74.8
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 2.9e-30 135.2 101 76.2
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 3.7e-30 134.8 103 74.8
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.7e-30 134.8 101 76.2
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 4.9e-30 134.4 101 75.2
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 8.3e-30 133.7 101 75.2
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 1.1e-29 133.3 101 76.2
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 2.4e-29 132.1 103 71.8
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-29 131.7 103 72.8
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 3.2e-29 131.7 99 74.7
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 4.1e-29 131.3 103 72.8
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 6.0e-28 127.5 93 78.5
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 1.0e-27 126.7 97 75.3
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 1.3e-27 126.3 103 71.8
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 1.3e-27 126.3 94 76.6
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 2.3e-27 125.6 97 75.3
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.1e-26 123.2 99 71.7
Gohir.D02G093150 Gossypium hirsutum HOM05D000216 ORTHO05D003638 7.3e-26 120.6 101 70.3
Gorai.006G017100 Gossypium raimondii HOM05D000216 ORTHO05D003638 7.3e-26 120.6 103 66.0
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 9.5e-26 120.2 103 68.9
CAN.G229.14 Capsicum annuum HOM05D000216 ORTHO05D003638 1.2e-25 119.8 91 75.8
Migut.L00411 Erythranthe guttata HOM05D000216 ORTHO05D003638 2.1e-25 119.0 92 73.9
Gorai.006G159100 Gossypium raimondii HOM05D000216 ORTHO05D003638 8.1e-25 117.1 96 71.9
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.1e-24 116.7 106 66.0
Gohir.D09G014950 Gossypium hirsutum HOM05D000216 ORTHO05D003638 4.0e-24 114.8 103 65.0
Nn4g23650 Nelumbo nucifera HOM05D000216 ORTHO05D003638 8.9e-24 113.6 90 74.4
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 2.6e-23 112.1 103 63.1
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 7.6e-23 110.5 86 74.4
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 9.9e-23 110.2 84 76.2
Medtr6g025340 Medicago truncatula HOM05D000216 ORTHO05D003638 5.4e-21 104.4 100 62.0
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 9.2e-21 103.6 83 73.5
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 2.1e-20 102.4 79 73.4
Migut.D01339 Erythranthe guttata HOM05D000216 ORTHO05D003638 2.1e-20 102.4 82 73.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.7e-20 102.1 78 74.4
Gorai.005G029600 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.0e-19 100.1 87 70.1
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-19 99.0 93 64.5
Gohir.D02G023550 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.3e-19 99.0 87 69.0
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.4e-16 89.0 93 61.3
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 1.2e-15 86.7 58 84.5
Gohir.D04G020733 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.7e-14 82.8 84 60.7
HanXRQChr13g0425721 Helianthus annuus HOM05D000216 ORTHO05D003638 2.9e-14 82.0 48 87.5
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 2.9e-14 82.0 48 87.5
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.8e-14 81.6 87 62.1
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.8e-14 81.6 87 62.1
Phvul.001G151500 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.9e-13 79.3 81 60.5
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.2e-12 76.6 42 90.5
PGSC0003DMG403017663 Solanum tuberosum HOM05D000216 ORTHO05D003518 1.6e-12 76.3 63 74.6
Migut.C00051 Erythranthe guttata HOM05D000216 ORTHO05D003638 2.1e-12 75.9 51 82.4
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.6e-12 74.7 66 69.7
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 6.0e-12 74.3 68 69.1
Nitab4.5_0001140g0200 Nicotiana tabacum HOM05D000216 ORTHO05D003638 7.8e-12 73.9 47 83.0
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 1.0e-11 73.6 65 69.2
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 1.3e-11 73.2 102 49.0
Gorai.012G024800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.7e-11 72.8 84 54.8
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 1.7e-11 72.8 103 43.7
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 5.1e-11 71.2 62 69.4
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 4.8e-09 64.7 39 82.1
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 1.4e-08 63.2 38 78.9
Nitab4.5_0000559g0180 Nicotiana tabacum HOM05D000216 ORTHO05D028337 2.4e-08 62.4 99 42.4
Potri.019G028601 Populus trichocarpa HOM05D000216 ORTHO05D003638 6.9e-08 60.8 36 77.8
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.2e-07 60.1 54 64.8
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.2e-07 60.1 54 64.8
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.2e-07 60.1 54 64.8
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.2e-07 60.1 54 64.8
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.2e-07 60.1 54 64.8
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 2.0e-07 59.3 36 77.8
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 5.8e-07 57.8 31 87.1
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 7.6e-07 57.4 34 79.4
Eucgr.G00227 Eucalyptus grandis HOM05D000216 ORTHO05D003638 9.9e-07 57.0 67 55.2
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 9.9e-07 57.0 31 87.1
Oeu024824.1 Olea europaea HOM05D000216 ORTHO05D003518 1.3e-06 56.6 35 80.0
Glyma.19G054201 Glycine max HOM05D000216 ORTHO05D003638 2.2e-06 55.8 32 87.5
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 2.9e-06 55.5 30 90.0
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 3.8e-06 55.1 31 83.9


User provided reference genes

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