Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7029 Trifolium pratense HOM05D002948 ORTHO05D003577 1.5e-83 312.8 150 100.0
Ca_20935_v3 Cicer arietinum L. HOM05D002948 ORTHO05D003577 1.9e-75 285.8 154 90.9
Medtr4g072020 Medicago truncatula HOM05D002948 ORTHO05D003577 3.3e-75 285.0 150 92.0
Psat7g140360 Pisum sativum HOM05D002948 ORTHO05D003577 1.7e-71 272.7 146 90.4
Duzib132G0750 Durio zibethinus HOM05D002948 ORTHO05D003577 1.2e-53 213.4 150 72.0
Thecc.02G074500 Theobroma cacao HOM05D002948 ORTHO05D003577 4.6e-53 211.5 150 72.7
Lj3g0025349 Lotus japonicus HOM05D002948 ORTHO05D003577 7.8e-53 210.7 150 68.7
Eucgr.G01735 Eucalyptus grandis HOM05D002948 ORTHO05D003577 2.3e-52 209.1 150 68.7
MD05G1055300 Malus domestica HOM05D002948 ORTHO05D003577 5.1e-52 208.0 152 71.1
Cpa.g.sc150.13 Carica papaya HOM05D002948 ORTHO05D003577 8.6e-52 207.2 154 68.8
COL.COLO4_00023 Corchorus olitorius HOM05D002948 ORTHO05D003577 1.5e-51 206.5 150 68.7
Duzib052G1212 Durio zibethinus HOM05D002948 ORTHO05D003577 1.9e-51 206.1 150 70.7
TWI75G1141 Tripterygium wilfordii HOM05D002948 ORTHO05D003577 2.5e-51 205.7 156 66.0
FAN15G0007 Fragaria x ananassa HOM05D002948 ORTHO05D003577 3.3e-51 205.3 151 70.9
FvH4_2g10570 Fragaria vesca HOM05D002948 ORTHO05D003577 5.6e-51 204.5 151 70.9
FAN20G1999 Fragaria x ananassa HOM05D002948 ORTHO05D003577 5.6e-51 204.5 151 70.9
FAN24G2709 Fragaria x ananassa HOM05D002948 ORTHO05D003577 5.6e-51 204.5 151 70.9
FAN27G1962 Fragaria x ananassa HOM05D002948 ORTHO05D003577 9.6e-51 203.8 151 70.2
TWI79G0104 Tripterygium wilfordii HOM05D002948 ORTHO05D003577 1.2e-50 203.4 158 64.6
MD10G1062500 Malus domestica HOM05D002948 ORTHO05D003577 4.7e-50 201.4 151 67.5
Haze_02235 Corylus avellana HOM05D002948 ORTHO05D003577 6.2e-50 201.1 153 69.3
PGR042G2860 Punica granatum HOM05D002948 ORTHO05D003577 1.1e-49 200.3 150 66.0
RcHm_v2.0_Chr6g0268211 Rosa chinensis HOM05D002948 ORTHO05D003577 1.2e-48 196.8 151 70.2
Duzib248G1070 Durio zibethinus HOM05D002948 ORTHO05D003577 1.5e-48 196.4 150 67.3
Manes.11G081600 Manihot esculenta HOM05D002948 ORTHO05D003577 1.5e-48 196.4 158 68.4
arahy.Tifrunner.gnm1.ann1.YG2Q7Y Arachis hypogaea HOM05D002948 ORTHO05D003577 2.6e-48 195.7 135 74.8
Ciclev10027873m.g Citrus clementina HOM05D002948 ORTHO05D003577 7.6e-48 194.1 162 61.1
Gohir.A13G091000 Gossypium hirsutum HOM05D002948 ORTHO05D003577 7.6e-48 194.1 150 65.3
HanXRQChr15g0478321 Helianthus annuus HOM05D002948 ORTHO05D003577 9.9e-48 193.7 150 62.7
arahy.Tifrunner.gnm1.ann1.C8NIIA Arachis hypogaea HOM05D002948 ORTHO05D003577 1.3e-47 193.4 135 74.1
Actinidia00576 Actinidia chinensis HOM05D002948 ORTHO05D003577 2.2e-47 192.6 133 71.4
Gorai.002G149300 Gossypium raimondii HOM05D002948 ORTHO05D003577 2.2e-47 192.6 150 65.3
Nitab4.5_0005932g0030 Nicotiana tabacum HOM05D002948 ORTHO05D003577 4.9e-47 191.4 150 66.0
Actinidia20472 Actinidia chinensis HOM05D002948 ORTHO05D003577 8.4e-47 190.7 147 66.7
Hma1.2p1_0032F.1_g020070 Hydrangea macrophylla HOM05D002948 ORTHO05D003577 8.4e-47 190.7 156 64.7
Oeu055637.1 Olea europaea HOM05D002948 ORTHO05D003577 1.1e-46 190.3 150 66.0
Cc02_g16860 Coffea canephora HOM05D002948 ORTHO05D003577 1.4e-46 189.9 151 65.6
FvH4_7g04860 Fragaria vesca HOM05D002948 ORTHO05D003577 1.9e-46 189.5 148 66.9
CiPaw.05G073700 Carya illinoinensis HOM05D002948 ORTHO05D003577 3.2e-46 188.7 154 66.2
Nitab4.5_0005266g0020 Nicotiana tabacum HOM05D002948 ORTHO05D003577 5.4e-46 188.0 150 65.3
Gohir.D04G165600 Gossypium hirsutum HOM05D002948 ORTHO05D003577 9.3e-46 187.2 150 62.7
Gorai.012G154100 Gossypium raimondii HOM05D002948 ORTHO05D003577 1.2e-45 186.8 150 62.7
THA.LOC104804343 Tarenaya hassleriana HOM05D002948 ORTHO05D003577 1.6e-45 186.4 155 63.9
PGSC0003DMG400026671 Solanum tuberosum HOM05D002948 ORTHO05D003577 3.5e-45 185.3 153 60.1
CANSAT11G0625 Cannabis sativa HOM05D002948 ORTHO05D003577 4.6e-45 184.9 150 66.0
Gohir.A04G123600 Gossypium hirsutum HOM05D002948 ORTHO05D003577 6.0e-45 184.5 150 61.3
CSS0024054 Camellia sinensis var. sinensis HOM05D002948 ORTHO05D003577 1.0e-44 183.7 150 62.7
CSS0028985 Camellia sinensis var. sinensis HOM05D002948 ORTHO05D003577 1.0e-44 183.7 150 62.7
ECA240G1699 Erigeron canadensis HOM05D002948 ORTHO05D003577 1.3e-44 183.3 150 60.7
Sopen10g024370 Solanum pennellii HOM05D002948 ORTHO05D003577 1.3e-44 183.3 150 60.7
CSS0040307 Camellia sinensis var. sinensis HOM05D002948 ORTHO05D003577 1.7e-44 183.0 126 67.5
Oeu010049.1 Olea europaea HOM05D002948 ORTHO05D003577 5.1e-44 181.4 150 59.3
Cfa005115 Carpinus fangiana HOM05D002948 ORTHO05D003577 1.1e-43 180.3 152 63.2
AUR62016840 Chenopodium quinoa HOM05D002948 ORTHO05D003577 2.5e-43 179.1 158 61.4
AUR62010378 Chenopodium quinoa HOM05D002948 ORTHO05D003577 3.3e-43 178.7 158 61.4
Manes.04G083000 Manihot esculenta HOM05D002948 ORTHO05D003577 3.3e-43 178.7 157 66.9
ClCG11G003830 Citrullus lanatus HOM05D002948 ORTHO05D003577 4.3e-43 178.3 150 62.0
CsaV3_2G015310 Cucumis sativus L. HOM05D002948 ORTHO05D003577 5.6e-43 177.9 150 61.3
MELO3C023359.2 Cucumis melo HOM05D002948 ORTHO05D003577 7.3e-43 177.6 150 62.0
Peaxi162Scf00016g00007 Petunia axillaris HOM05D002948 ORTHO05D003577 9.6e-43 177.2 150 63.3
Potri.004G163300 Populus trichocarpa HOM05D002948 ORTHO05D003577 2.1e-42 176.0 140 65.7
Oeu002952.1 Olea europaea HOM05D002948 ORTHO05D003577 3.6e-42 175.3 150 62.0
SGA_v2.0_scaffold207G41879 Striga asiatica HOM05D002948 ORTHO05D003577 4.8e-42 174.9 151 60.3
EL10Ac9g21627 Beta vulgaris HOM05D002948 ORTHO05D003577 8.1e-42 174.1 159 60.4
Solyc10g054440.3 Solanum lycopersicum HOM05D002948 ORTHO05D003577 8.1e-42 174.1 150 59.3
CiPaw.06G127900 Carya illinoinensis HOM05D002948 ORTHO05D003577 1.4e-41 173.3 150 62.0
PGSC0003DMG400001662 Solanum tuberosum HOM05D002948 ORTHO05D003577 1.4e-41 173.3 160 61.9
Dinv41995 Davidia involucrata HOM05D002948 ORTHO05D003577 3.1e-41 172.2 152 61.2
Sabra04G0109600 Salix brachista HOM05D002948 ORTHO05D003577 4.0e-41 171.8 150 62.0
Lsat_1_v5_gn_3_44201 Lactuca sativa HOM05D002948 ORTHO05D003577 6.9e-41 171.0 151 57.0
Sed0015136 Sechium edule HOM05D002948 ORTHO05D003577 9.0e-41 170.6 150 61.3
HanXRQChr17g0543721 Helianthus annuus HOM05D002948 ORTHO05D003577 2.0e-40 169.5 150 57.3
SalBow6G3895 Salvia bowleyana HOM05D002948 ORTHO05D003577 2.0e-40 169.5 151 59.6
QL11p046480 Quercus lobata HOM05D002948 ORTHO05D003577 2.6e-40 169.1 153 61.4
Lalb_Chr03g0025331 Lupinus albus HOM05D002948 ORTHO05D003577 5.8e-40 167.9 111 76.6
Lj5P189T22 Lonicera japonica HOM05D002948 ORTHO05D003577 9.9e-40 167.2 147 60.5
Ah.01g018720 Amaranthus hybridus HOM05D002948 ORTHO05D003577 1.7e-39 166.4 154 61.0
Gohir.D04G165700 Gossypium hirsutum HOM05D002948 ORTHO05D003577 1.7e-39 166.4 150 56.0
CAN.G170.106 Capsicum annuum HOM05D002948 ORTHO05D003577 2.2e-39 166.0 152 59.2
AT2G16500 Arabidopsis thaliana HOM05D002948 ORTHO05D003577 2.9e-39 165.6 154 59.1
THA.LOC104807291 Tarenaya hassleriana HOM05D002948 ORTHO05D003577 4.9e-39 164.9 156 60.9
CSS0006469 Camellia sinensis var. sinensis HOM05D002948 ORTHO05D003577 6.4e-39 164.5 150 58.0
MSTRG.5424 Avicennia marina HOM05D002948 ORTHO05D003577 8.4e-39 164.1 151 57.0
Nitab4.5_0010630g0010 Nicotiana tabacum HOM05D002948 ORTHO05D003577 1.1e-38 163.7 153 56.9
Glyma.04G007700 Glycine max HOM05D002948 ORTHO05D003577 1.9e-38 162.9 152 59.2
Lsat_1_v5_gn_4_67421 Lactuca sativa HOM05D002948 ORTHO05D003577 3.2e-38 162.2 142 59.9
FAN06G4601 Fragaria x ananassa HOM05D002948 ORTHO05D003577 5.4e-38 161.4 151 60.3
Gohir.D02G220800 Gossypium hirsutum HOM05D002948 ORTHO05D003577 7.1e-38 161.0 151 58.9
Lalb_Chr19g0138971 Lupinus albus HOM05D002948 ORTHO05D003577 9.3e-38 160.6 152 57.9
Carub.0003s3028 Capsella rubella HOM05D002948 ORTHO05D003577 1.2e-37 160.2 149 60.4
Nn5g29243 Nelumbo nucifera HOM05D002948 ORTHO05D003577 1.2e-37 160.2 150 56.7
Gohir.A03G199500 Gossypium hirsutum HOM05D002948 ORTHO05D003577 1.6e-37 159.8 151 59.6
AL3G52690 Arabidopsis lyrata HOM05D002948 ORTHO05D003577 2.1e-37 159.5 150 58.7
Thhalv10022578m.g Eutrema salsugineum HOM05D002948 ORTHO05D003577 2.1e-37 159.5 150 59.3
Nitab4.5_0001317g0070 Nicotiana tabacum HOM05D002948 ORTHO05D003577 2.1e-37 159.5 153 56.9
MSTRG.20037 Avicennia marina HOM05D002948 ORTHO05D003577 3.5e-37 158.7 150 56.0
CARHR106720 Cardamine hirsuta HOM05D002948 ORTHO05D003577 4.6e-37 158.3 149 59.7
Lalb_Chr01g0002141 Lupinus albus HOM05D002948 ORTHO05D003577 6.0e-37 157.9 159 56.0
Aa31LG8G13820 Aethionema arabicum HOM05D002948 ORTHO05D003577 7.9e-37 157.5 147 57.8
Migut.B00171 Erythranthe guttata HOM05D002948 ORTHO05D003577 7.9e-37 157.5 146 55.5
Rhsim11G0184100 Rhododendron simsii HOM05D002948 ORTHO05D003577 7.9e-37 157.5 150 56.0
Glyma.06G007500 Glycine max HOM05D002948 ORTHO05D003577 1.0e-36 157.1 146 58.2
Lj1g0012396 Lotus japonicus HOM05D002948 ORTHO05D003577 1.0e-36 157.1 152 60.5
VMungo1309G2352 Vigna mungo HOM05D002948 ORTHO05D003577 1.3e-36 156.8 101 77.2
Phvul.009G002500 Phaseolus vulgaris HOM05D002948 ORTHO05D003577 1.8e-36 156.4 101 78.2
Prupe.8G083100 Prunus persica HOM05D002948 ORTHO05D003577 2.3e-36 156.0 104 74.0
TAR628G1095 Trochodendron aralioides HOM05D002948 ORTHO05D003577 2.3e-36 156.0 151 57.0
Sopen01g052570 Solanum pennellii HOM05D002948 ORTHO05D003577 3.0e-36 155.6 111 72.1
Gorai.005G248700 Gossypium raimondii HOM05D002948 ORTHO05D003577 3.9e-36 155.2 107 72.9
unitig_60.g25437 Utricularia gibba HOM05D002948 ORTHO05D003577 6.7e-36 154.5 151 53.6
Atru.chr5.3152 Acer truncatum HOM05D002948 ORTHO05D003577 8.7e-36 154.1 169 51.5
Atru.chr5.3166 Acer truncatum HOM05D002948 ORTHO05D003577 1.1e-35 153.7 170 51.2
BcaNung07079 Brassica carinata HOM05D002948 ORTHO05D003577 1.5e-35 153.3 132 63.6
A03p63100 Brassica napus HOM05D002948 ORTHO05D003577 1.5e-35 153.3 133 63.2
C07p60730 Brassica napus HOM05D002948 ORTHO05D003577 1.5e-35 153.3 132 63.6
BolC7t46502H Brassica oleracea HOM05D002948 ORTHO05D003577 1.5e-35 153.3 132 63.6
BraA03t15385Z Brassica rapa HOM05D002948 ORTHO05D003577 1.5e-35 153.3 133 63.2
AL7G16490 Arabidopsis lyrata HOM05D002948 ORTHO05D003577 4.3e-35 151.8 136 60.3
Sc08g0000930 Simmondsia chinensis HOM05D002948 ORTHO05D003577 4.3e-35 151.8 146 56.8
Sc18g0005400 Simmondsia chinensis HOM05D002948 ORTHO05D003577 7.4e-35 151.0 121 63.6
Aqoxy5G01475 Aquilegia oxysepala HOM05D002948 ORTHO05D003577 1.3e-34 150.2 117 68.4
BcaB03g16368 Brassica carinata HOM05D002948 ORTHO05D003577 1.6e-34 149.8 149 57.7
Sp7g32490 Schrenkiella parvula HOM05D002948 ORTHO05D003577 1.6e-34 149.8 131 61.8
Thhalv10024529m.g Eutrema salsugineum HOM05D002948 ORTHO05D003577 2.8e-34 149.1 138 59.4
TAR376G0314 Trochodendron aralioides HOM05D002948 ORTHO05D003577 2.8e-34 149.1 124 64.5
TAR381G1534 Trochodendron aralioides HOM05D002948 ORTHO05D003577 3.7e-34 148.7 150 52.7
AT4G34710 Arabidopsis thaliana HOM05D002948 ORTHO05D003577 4.8e-34 148.3 134 61.2
PSO210G1300 Papaver somniferum HOM05D002948 ORTHO05D003577 6.2e-34 147.9 155 53.5
Carub.0007s0558 Capsella rubella HOM05D002948 ORTHO05D003577 1.1e-33 147.1 135 60.0
unitig_0.g48 Utricularia gibba HOM05D002948 ORTHO05D003577 1.4e-33 146.7 156 50.6
MBI05_g16275_MAGBIO Magnolia biondii HOM05D002948 ORTHO05D003577 2.4e-33 146.0 150 56.0
PSO170G0240 Papaver somniferum HOM05D002948 ORTHO05D003577 4.0e-33 145.2 155 52.9
Sp3g29770 Schrenkiella parvula HOM05D002948 ORTHO05D003577 4.0e-33 145.2 121 63.6
BcaC01g00879 Brassica carinata HOM05D002948 ORTHO05D003577 1.5e-32 143.3 134 58.2
A10p29570 Brassica napus HOM05D002948 ORTHO05D041709 1.5e-32 143.3 134 58.2
C03p85520 Brassica napus HOM05D002948 ORTHO05D003577 1.5e-32 143.3 134 58.2
BolC3t20839H Brassica oleracea HOM05D002948 ORTHO05D003577 1.5e-32 143.3 134 58.2
A08p16630 Brassica napus HOM05D002948 ORTHO05D003577 2.6e-32 142.5 134 58.2
BraA08t33628Z Brassica rapa HOM05D002948 ORTHO05D003577 2.6e-32 142.5 134 58.2
BcaB03g11816 Brassica carinata HOM05D002948 ORTHO05D003577 3.4e-32 142.1 137 56.9
THA.LOC104820175 Tarenaya hassleriana HOM05D002948 ORTHO05D003577 5.8e-32 141.4 155 54.2
CARHR243010 Cardamine hirsuta HOM05D002948 ORTHO05D003577 1.7e-31 139.8 137 59.1
HPP92_020655 Vanilla planifolia HOM05D002948 ORTHO05D003577 1.1e-30 137.1 101 70.3
MSTRG.16854 Avicennia marina HOM05D002948 ORTHO05D003577 2.4e-30 136.0 150 52.7
EL10Ac2g04735 Beta vulgaris HOM05D002948 ORTHO05D003577 4.6e-29 131.7 109 62.4
SHI43297 Sapria himalayana HOM05D002948 ORTHO05D003577 6.0e-29 131.3 104 66.3
Os06g0131300 Oryza sativa ssp. japonica HOM05D002948 ORTHO05D003577 1.8e-28 129.8 146 52.7
SalBow3G2063 Salvia bowleyana HOM05D002948 ORTHO05D003577 2.3e-28 129.4 110 60.9
Zm00001eb378210 Zea mays HOM05D002948 ORTHO05D003577 5.1e-28 128.3 101 66.3
CDE02G4566 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 8.7e-28 127.5 150 50.0
BraA01t00364Z Brassica rapa HOM05D002948 ORTHO05D003577 1.1e-27 127.1 107 59.8
CDE04G0548 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.9e-27 126.3 154 48.7
BcaNung00669 Brassica carinata HOM05D002948 ORTHO05D003577 4.3e-27 125.2 107 58.9
BolC1t00399H Brassica oleracea HOM05D002948 ORTHO05D003577 4.3e-27 125.2 116 56.0
BcaNung00671 Brassica carinata HOM05D002948 ORTHO05D003577 9.6e-27 124.0 109 59.6
C01p04110 Brassica napus HOM05D002948 ORTHO05D003577 9.6e-27 124.0 109 59.6
BcaB03g15553 Brassica carinata HOM05D002948 ORTHO05D003577 1.6e-26 123.2 108 60.2
BcaNung05379 Brassica carinata HOM05D002948 ORTHO05D003577 2.1e-26 122.9 106 58.5
A01p03800 Brassica napus HOM05D002948 ORTHO05D003577 2.1e-26 122.9 109 58.7
BraA01t00365Z Brassica rapa HOM05D002948 ORTHO05D003577 2.1e-26 122.9 109 58.7
C01p04100 Brassica napus HOM05D002948 ORTHO05D003577 3.7e-26 122.1 107 57.9
BcaNung05380 Brassica carinata HOM05D002948 ORTHO05D003577 3.4e-24 115.5 102 56.9
Migut.N01279 Erythranthe guttata HOM05D002948 ORTHO05D003577 1.0e-23 114.0 122 54.1
PGR142G0309 Punica granatum HOM05D002948 ORTHO05D003577 3.8e-23 112.1 106 52.8
A01p03790 Brassica napus HOM05D002948 ORTHO05D003577 8.4e-23 110.9 107 56.1
BcaNung00674 Brassica carinata HOM05D002948 ORTHO05D003577 1.9e-22 109.8 70 72.9
CDE09G0099 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.9e-22 109.8 100 63.0
Nn6g32257 Nelumbo nucifera HOM05D002948 ORTHO05D003577 1.9e-22 109.8 150 45.3
CDE02G0749 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 9.3e-22 107.5 145 48.3
SEGI_07639 Sequoiadendron giganteum HOM05D002948 ORTHO05D003577 3.5e-21 105.5 106 52.8
ATR0149G028 Amborella trichopoda HOM05D002948 ORTHO05D003577 1.0e-20 104.0 106 56.6
Thecc.04G202400 Theobroma cacao HOM05D002948 ORTHO05D003577 6.7e-20 101.3 108 53.7
CAN.G332.1 Capsicum annuum HOM05D002948 ORTHO05D003577 8.7e-20 100.9 78 61.5
PGR142G4254 Punica granatum HOM05D002948 ORTHO05D003577 1.3e-18 97.1 119 43.7
COL.COLO4_20154 Corchorus olitorius HOM05D002948 ORTHO05D003577 3.7e-18 95.5 108 50.0
Pp3c5_3660 Physcomitrium patens HOM05D002948 ORTHO05D003577 2.2e-15 86.3 118 40.7
AagrBONN_evm.TU.Sc2ySwM_344.5194 Anthoceros agrestis HOM05D002948 ORTHO05D003577 5.0e-15 85.1 111 43.2
Mapoly0162s0006 Marchantia polymorpha HOM05D002948 ORTHO05D003577 2.7e-13 79.3 102 41.2
Dinv23451 Davidia involucrata HOM05D002948 ORTHO05D003577 3.6e-13 79.0 97 47.4
Pp3c6_19550 Physcomitrium patens HOM05D002948 ORTHO05D003577 4.6e-13 78.6 67 55.2
AagrBONN_evm.TU.Sc2ySwM_228.5361 Anthoceros agrestis HOM05D002948 ORTHO05D003577 3.0e-12 75.9 107 41.1
SMO367G0243 Selaginella moellendorffii HOM05D002948 ORTHO05D003577 1.5e-11 73.6 67 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1547 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.5e-11 72.8 99 42.4
AagrBONN_evm.TU.Sc2ySwM_228.5714 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.5e-11 72.8 107 41.1
SMO367G0280 Selaginella moellendorffii HOM05D002948 ORTHO05D003577 1.5e-08 63.5 100 35.0
PGR142G4381 Punica granatum HOM05D002948 ORTHO05D003577 4.5e-08 62.0 68 51.5


User provided reference genes

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