Gene: Solyc10g054440.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g054440.3
  • Transcript Identifier Solyc10g054440.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 54469918-54472041 : negative

Gene Family Information

  • ID HOM05D002948
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g054440.3.1
  • uniprot A0A3Q7IH94
  • gene_id Solyc10g054440

Descriptions

  • Description arginine decarboxylase 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G34710
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G34710
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G34710
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G34710
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G34710
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT4G34710
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G34710
GO:0009446
ISO
PLAZA Integrative Orthologyputrescine biosynthetic process AT4G34710
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT4G34710
GO:0006596
ISO
PLAZA Integrative Orthologypolyamine biosynthetic process AT4G34710
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G34710
GO:0006527
IEA
GOA Databasearginine catabolic process
GO:0006527
IEA
InterProarginine catabolic process
GO:0033388
IBA
GOA Databaseputrescine biosynthetic process from arginine
GO:0008295
IEA
GOA Databasespermidine biosynthetic process
GO:0008295
IEA
InterProspermidine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G34710
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G34710
GO:0008792
IBA
IEA
GOA Databasearginine decarboxylase activity
GO:0008792
IEA
InterProarginine decarboxylase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G34710
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G34710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002985 Arginine decarboxylase
IPR029066 PLP-binding barrel
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
IPR000183 Ornithine/DAP/Arg decarboxylase
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Mapman id Description
8.1.1.1 Polyamine metabolism.putrescine biosynthesis.plastidial/nuclear pathway.arginine decarboxylase