Gene: Sopen01g052570

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g052570
  • Transcript Identifier Sopen01g052570.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107994431-107996590 : positive

Gene Family Information

  • ID HOM05D002948
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g052570.1

Descriptions

  • Description Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC) - Pisum sativum (Garden pea), encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1. | arginine decarboxylase 2 (ADC2) | CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal , Orn/DAP/Arg decarboxylase 2, conserved site , Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site , Ornithine/DAP/Arg decarboxylase , Arginine decarboxylase , Orn/DAP/Arg decarboxylase 2, N-terminal | BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009446
ISO
PLAZA Integrative Orthologyputrescine biosynthetic process AT4G34710
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G34710
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G34710
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G34710
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G34710
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT4G34710
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G34710
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT4G34710
GO:0006596
ISO
PLAZA Integrative Orthologypolyamine biosynthetic process AT4G34710
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT4G34710
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G34710
GO:0008295
IEA
InterProspermidine biosynthetic process
GO:0006527
IEA
InterProarginine catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G34710
GO:0003824
IEA
InterProcatalytic activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G34710
GO:0008792
IEA
InterProarginine decarboxylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G34710
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G34710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
IPR029066 PLP-binding barrel
IPR002985 Arginine decarboxylase
IPR000183 Ornithine/DAP/Arg decarboxylase
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Mapman id Description
8.1.1.1 Polyamine metabolism.putrescine biosynthesis.plastidial/nuclear pathway.arginine decarboxylase