Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4454 Trifolium pratense HOM05D000268 ORTHO05D004469 2.7e-123 445.3 212 100.0
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 4.9e-101 371.3 321 61.7
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 5.1e-90 334.7 325 55.7
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 2.5e-89 332.4 321 55.1
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 3.9e-82 308.5 315 53.3
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 9.6e-73 277.3 317 48.6
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 8.1e-72 274.2 322 48.4
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 3.1e-71 272.3 321 47.7
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 9.0e-71 270.8 320 47.5
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 3.4e-70 268.9 318 47.2
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 3.4e-70 268.9 321 47.0
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.3e-69 266.9 321 46.7
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 4.2e-68 261.9 321 46.7
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 2.0e-62 243.0 173 68.2
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 5.8e-62 241.5 173 67.1
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 6.5e-61 238.0 325 42.2
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 8.4e-61 237.7 323 43.3
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 7.9e-59 231.1 324 41.0
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 3.0e-58 229.2 172 64.0
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 3.0e-58 229.2 172 64.0
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 3.9e-58 228.8 171 64.9
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 1.1e-57 227.3 301 43.9
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 1.1e-57 227.3 174 62.1
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.5e-57 226.9 323 41.8
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 1.9e-57 226.5 324 40.7
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 7.4e-57 224.6 324 40.4
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 1.3e-56 223.8 307 40.4
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.6e-56 223.4 321 39.6
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 2.2e-56 223.0 322 41.9
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.8e-56 222.6 168 63.7
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 8.2e-56 221.1 200 56.0
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 1.1e-55 220.7 307 39.7
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.4e-55 220.3 176 60.8
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.4e-55 220.3 198 55.6
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 1.4e-55 220.3 176 61.9
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.8e-55 219.9 311 39.2
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 2.4e-55 219.5 324 39.5
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 3.1e-55 219.2 176 60.8
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 3.1e-55 219.2 176 60.8
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 4.1e-55 218.8 198 55.6
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 5.3e-55 218.4 322 40.4
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 9.0e-55 217.6 175 60.0
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 1.2e-54 217.2 171 60.2
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 1.2e-54 217.2 323 40.9
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 1.2e-54 217.2 191 55.5
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.5e-54 216.9 200 55.0
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 1.5e-54 216.9 169 61.5
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 1.5e-54 216.9 320 39.7
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.0e-54 216.5 175 59.4
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.0e-54 216.5 176 60.2
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.6e-54 216.1 173 61.3
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 2.6e-54 216.1 176 59.1
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 4.5e-54 215.3 324 40.1
Nitab4.5_0004932g0040 Nicotiana tabacum HOM05D000268 ORTHO05D004469 7.7e-54 214.5 169 60.9
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 7.7e-54 214.5 175 57.7
Atru.chr3.488 Acer truncatum HOM05D000268 ORTHO05D004469 1.0e-53 214.2 171 60.8
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.0e-53 214.2 166 61.4
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 1.0e-53 214.2 312 41.3
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.0e-53 214.2 200 55.5
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 1.7e-53 213.4 169 61.5
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 2.9e-53 212.6 175 59.4
Eucgr.H01928 Eucalyptus grandis HOM05D000268 ORTHO05D004469 3.8e-53 212.2 318 39.3
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 5.0e-53 211.8 322 38.5
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 8.5e-53 211.1 311 40.8
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 1.1e-52 210.7 311 40.8
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 1.1e-52 210.7 322 38.8
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 2.5e-52 209.5 311 41.5
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 3.2e-52 209.1 321 38.9
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 3.2e-52 209.1 177 59.9
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 7.2e-52 208.0 176 59.7
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 1.2e-51 207.2 309 39.5
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 1.6e-51 206.8 169 61.5
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 2.1e-51 206.5 167 59.3
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 2.1e-51 206.5 166 60.8
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 6.1e-51 204.9 171 58.5
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 1.4e-50 203.8 166 59.6
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 1.8e-50 203.4 317 38.8
SHI08704 Sapria himalayana HOM05D000268 ORTHO05D004469 3.0e-50 202.6 180 57.2
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 3.9e-50 202.2 170 59.4
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 6.7e-50 201.4 169 56.2
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 8.8e-50 201.1 171 58.5
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 1.1e-49 200.7 188 55.3
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 3.3e-49 199.1 164 57.3
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 3.3e-49 199.1 166 58.4
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 2.8e-48 196.1 321 37.1
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 2.8e-48 196.1 321 37.1
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 2.4e-47 193.0 166 54.8
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 3.1e-47 192.6 293 37.9
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 4.1e-47 192.2 164 56.7
Lj3g0021520 Lotus japonicus HOM05D000268 ORTHO05D004469 9.1e-47 191.0 172 54.7
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 9.1e-47 191.0 169 54.4
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.5e-46 190.3 175 54.3
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.0e-46 189.9 164 55.5
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 2.2e-45 186.4 314 35.4
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 1.4e-44 183.7 291 37.8
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 4.7e-43 178.7 314 35.0
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 4.7e-43 178.7 170 52.9
Lj4g0026497 Lotus japonicus HOM05D000268 ORTHO05D004469 3.9e-42 175.6 206 47.1
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 5.1e-42 175.3 314 34.7
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 2.6e-41 172.9 325 34.5
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 1.3e-40 170.6 265 37.0
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 1.7e-40 170.2 327 34.6
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 3.7e-40 169.1 314 34.4
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 4.8e-40 168.7 318 34.3
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 6.3e-40 168.3 280 36.4
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 1.1e-39 167.5 317 34.4
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 5.3e-39 165.2 254 37.4
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 9.1e-39 164.5 166 48.2
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 2.6e-38 162.9 261 37.5
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 3.5e-38 162.5 258 37.2
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 3.5e-38 162.5 258 37.2
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 3.5e-38 162.5 258 37.2
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 7.7e-38 161.4 259 36.3
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 7.7e-38 161.4 259 36.3
HPP92_007809 Vanilla planifolia HOM05D000268 ORTHO05D004469 6.5e-37 158.3 172 47.1
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 1.2e-35 154.1 169 43.8
CDE09G0016 Ceratophyllum demersum HOM05D000268 ORTHO05D004469 4.8e-32 142.1 165 44.2
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 1.1e-31 141.0 170 44.1
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 3.4e-25 119.4 178 36.5
Psat6g097480 Pisum sativum HOM05D003780 ORTHO05D004469 4.7e-11 72.4 66 56.1
Psat0ss24986g0120 Pisum sativum HOM05D000268 ORTHO05D004469 1.0e-10 71.2 178 28.7
BcaC07g40978 Brassica carinata HOM05D000268 ORTHO05D027468 3.0e-10 69.7 122 33.6
Psat0ss24986g0080 Pisum sativum HOM05D000268 ORTHO05D004469 5.2e-10 68.9 66 56.1
Actinidia04607 Actinidia chinensis HOM05D000268 ORTHO05D004469 7.0e-07 58.5 40 62.5


User provided reference genes

Program Settings