Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37358 Trifolium pratense HOM05D000246 ORTHO05D009140 7.6e-264 913.3 460 100.0
Medtr3g063040 Medicago truncatula HOM05D000246 ORTHO05D009140 6.3e-226 787.3 461 85.0
Ca_15092_v3 Cicer arietinum L. HOM05D000246 ORTHO05D009140 6.3e-218 760.8 462 82.5
Psat5g146240 Pisum sativum HOM05D000246 ORTHO05D009140 9.4e-206 720.3 453 79.7
Lj6g0007866 Lotus japonicus HOM05D000246 ORTHO05D009140 5.7e-187 657.9 476 72.7
Glyma.18G048900 Glycine max HOM05D000246 ORTHO05D009140 1.6e-184 649.8 472 72.0
Phvul.006G082600 Phaseolus vulgaris HOM05D000246 ORTHO05D009140 2.0e-168 596.3 472 66.7
Lalb_Chr15g0085521 Lupinus albus HOM05D000246 ORTHO05D009140 8.6e-167 590.9 463 66.5
arahy.Tifrunner.gnm1.ann1.32IKG8 Arachis hypogaea HOM05D000246 ORTHO05D009140 1.9e-161 573.2 467 64.9
TPR.G37336 Trifolium pratense HOM05D000246 ORTHO05D009140 1.8e-156 556.6 312 91.0
arahy.Tifrunner.gnm1.ann1.KDY275 Arachis hypogaea HOM05D000246 ORTHO05D009140 1.2e-152 543.9 451 64.1
QL01p023430 Quercus lobata HOM05D000246 ORTHO05D009140 1.8e-148 530.0 476 58.8
CiPaw.13G059300 Carya illinoinensis HOM05D000246 ORTHO05D009140 4.3e-142 508.8 471 56.7
FAN11G0500 Fragaria x ananassa HOM05D000246 ORTHO05D009140 2.4e-140 503.1 471 56.3
FAN16G3185 Fragaria x ananassa HOM05D000246 ORTHO05D009140 2.4e-140 503.1 471 56.3
Prupe.6G037500 Prunus persica HOM05D000246 ORTHO05D009140 7.6e-139 498.0 466 57.3
RcHm_v2.0_Chr5g0074061 Rosa chinensis HOM05D000246 ORTHO05D009140 1.1e-137 494.2 467 56.1
Atru.chr10.2369 Acer truncatum HOM05D000246 ORTHO05D009140 2.3e-135 486.5 477 55.6
Manes.18G122300 Manihot esculenta HOM05D000246 ORTHO05D009140 3.9e-135 485.7 470 54.9
CANSAT54G0602 Cannabis sativa HOM05D000246 ORTHO05D009140 1.5e-134 483.8 470 54.5
MD03G1046200 Malus domestica HOM05D000246 ORTHO05D009140 3.4e-131 472.6 467 53.5
Haze_24501 Corylus avellana HOM05D000246 ORTHO05D009140 9.3e-129 464.5 460 55.7
Sc12g0000050 Simmondsia chinensis HOM05D000246 ORTHO05D009140 1.2e-128 464.2 473 52.2
Rhsim13G0056800 Rhododendron simsii HOM05D000246 ORTHO05D009140 4.6e-128 462.2 474 53.0
MBI15_g11744_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D009140 1.8e-127 460.3 485 51.8
Duzib168G1839 Durio zibethinus HOM05D000246 ORTHO05D009140 1.1e-126 457.6 466 52.8
FvH4_3g41250 Fragaria vesca HOM05D000246 ORTHO05D009140 5.6e-126 455.3 423 56.7
Potri.013G161200 Populus trichocarpa HOM05D000246 ORTHO05D009140 1.8e-124 450.3 480 50.8
Sopen09g012230 Solanum pennellii HOM05D000246 ORTHO05D009140 1.8e-124 450.3 474 51.3
Sed0012503 Sechium edule HOM05D000246 ORTHO05D009140 4.0e-124 449.1 469 52.7
Glyma.11G201900 Glycine max HOM05D000246 ORTHO05D009140 6.9e-124 448.4 299 75.9
vmacro02858 Vaccinium macrocarpon HOM05D000246 ORTHO05D009140 1.2e-123 447.6 487 50.7
TWI74G1630 Tripterygium wilfordii HOM05D000246 ORTHO05D009140 2.0e-123 446.8 469 52.2
TAR633G0607 Trochodendron aralioides HOM05D000246 ORTHO05D009140 2.0e-123 446.8 478 53.3
MELO3C008833.2 Cucumis melo HOM05D000246 ORTHO05D009140 5.8e-123 445.3 471 52.9
CAN.G478.17 Capsicum annuum HOM05D000246 ORTHO05D009140 1.3e-122 444.1 492 49.8
GSVIVG01024519001 Vitis vinifera HOM05D000246 ORTHO05D009140 1.3e-122 444.1 541 46.6
CSS0047282 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009140 6.5e-122 441.8 467 51.4
Nitab4.5_0000539g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 3.2e-121 439.5 472 51.3
EL10Ac4g08390 Beta vulgaris HOM05D000246 ORTHO05D009140 1.2e-120 437.6 464 50.9
Solyc09g018690.4 Solanum lycopersicum HOM05D000246 ORTHO05D009140 1.0e-119 434.5 474 50.8
CsaV3_4G012090 Cucumis sativus L. HOM05D000246 ORTHO05D009140 1.3e-119 434.1 472 52.1
AUR62037584 Chenopodium quinoa HOM05D000246 ORTHO05D009140 2.3e-119 433.3 455 52.7
Lj1A109T41 Lonicera japonica HOM05D000246 ORTHO05D009140 1.5e-118 430.6 467 48.8
VMungo0540G2472 Vigna mungo HOM05D000246 ORTHO05D009140 1.5e-118 430.6 299 73.2
Hund18366 Selenicereus undatus HOM05D000246 ORTHO05D009140 5.7e-118 428.7 463 49.5
Peaxi162Scf00293g00723 Petunia axillaris HOM05D000246 ORTHO05D009140 3.7e-117 426.0 491 48.3
Cc01_g15610 Coffea canephora HOM05D000246 ORTHO05D009140 3.4e-115 419.5 472 48.5
HanXRQChr01g0013541 Helianthus annuus HOM05D000246 ORTHO05D009140 5.0e-114 415.6 461 48.4
Aqoxy5G02490 Aquilegia oxysepala HOM05D000246 ORTHO05D009140 6.7e-111 405.2 467 47.8
DCAR_004785 Daucus carota HOM05D000246 ORTHO05D009140 9.7e-110 401.4 475 48.0
SGA_v2.0_scaffold158G37464 Striga asiatica HOM05D000246 ORTHO05D009140 6.3e-109 398.7 461 48.2
ECA248G0782 Erigeron canadensis HOM05D000246 ORTHO05D009140 1.2e-107 394.4 459 47.1
Oeu020449.1 Olea europaea HOM05D000246 ORTHO05D009140 1.2e-107 394.4 467 47.5
Migut.D00789 Erythranthe guttata HOM05D000246 ORTHO05D009140 5.9e-107 392.1 464 47.0
Sabra13G0128900 Salix brachista HOM05D000246 ORTHO05D009140 5.5e-105 385.6 450 48.2
ATR1127G158 Amborella trichopoda HOM05D000246 ORTHO05D009140 3.3e-102 376.3 476 45.8
MELO3C008825.2 Cucumis melo HOM05D000246 ORTHO05D009140 3.3e-102 376.3 321 58.9
Actinidia11642 Actinidia chinensis HOM05D000246 ORTHO05D009140 9.7e-102 374.8 320 59.1
Nitab4.5_0002399g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 1.7e-101 374.0 434 49.3
Ciclev10001421m.g Citrus clementina HOM05D000246 ORTHO05D009140 4.8e-101 372.5 401 52.6
Ah.04g164140 Amaranthus hybridus HOM05D000246 ORTHO05D009140 2.6e-99 366.7 476 46.0
ClCG04G005480 Citrullus lanatus HOM05D000246 ORTHO05D009140 2.2e-98 363.6 507 44.4
SEGI_37344 Sequoiadendron giganteum HOM05D000246 ORTHO05D009140 7.2e-97 358.6 488 43.2
MSTRG.18522 Avicennia marina HOM05D000246 ORTHO05D009140 6.1e-96 355.5 432 47.5
CsaV3_4G012100 Cucumis sativus L. HOM05D000246 ORTHO05D009140 7.9e-96 355.1 320 55.3
Lsat_1_v5_gn_5_176881 Lactuca sativa HOM05D000246 ORTHO05D009140 6.7e-95 352.1 450 45.3
HPP92_014358 Vanilla planifolia HOM05D000246 ORTHO05D009140 5.7e-94 349.0 464 43.5
Os07g0681600 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D009140 1.1e-89 334.7 468 42.3
Zm00001eb330800 Zea mays HOM05D000246 ORTHO05D009140 2.0e-86 323.9 498 41.4
SMO367G0949 Selaginella moellendorffii HOM05D000246 ORTHO05D009140 7.5e-70 268.9 459 36.6
Pp3c12_1610 Physcomitrium patens HOM05D000246 ORTHO05D009140 2.7e-67 260.4 489 36.2
Mapoly0130s0046 Marchantia polymorpha HOM05D000246 ORTHO05D009140 1.5e-62 244.6 327 42.2
AagrBONN_evm.TU.Sc2ySwM_228.2819 Anthoceros agrestis HOM05D000246 ORTHO05D009140 4.4e-62 243.0 476 34.0
VMungo0540G0783 Vigna mungo HOM05D000246 ORTHO05D009140 2.6e-54 217.2 208 57.2
Dinv17919 Davidia involucrata HOM05D000246 ORTHO05D009140 1.3e-53 214.9 159 67.9
PGSC0003DMG402025422 Solanum tuberosum HOM05D000246 ORTHO05D009140 1.2e-51 208.4 265 43.4
SGA_v2.0_scaffold158G37461 Striga asiatica HOM05D000246 ORTHO05D009140 7.1e-44 182.6 189 51.9
MD11G1048500 Malus domestica HOM05D000246 ORTHO05D009140 2.3e-42 177.6 197 49.2
CBR_g39230 Chara braunii HOM05D000246 ORTHO05D009140 2.3e-39 167.5 359 35.4
FvH4_4g07250 Fragaria vesca HOM05D002724 ORTHO05D002995 6.4e-37 159.5 190 50.5
MD11G1048600 Malus domestica HOM05D000246 ORTHO05D009140 2.0e-30 137.9 119 58.8
FAN12G4280 Fragaria x ananassa HOM05D000289 ORTHO05D209272 9.3e-28 129.0 146 53.4
TPR.G20587 Trifolium pratense HOM05D000246 ORTHO05D009140 2.1e-27 127.9 75 85.3
RcHm_v2.0_Chr5g0074051 Rosa chinensis HOM05D000246 ORTHO05D009140 2.9e-21 107.5 79 65.8
Actinidia23144 Actinidia chinensis HOM05D000246 ORTHO05D009140 6.4e-21 106.3 99 57.6
Atru.chr10.2371 Acer truncatum HOM05D000246 ORTHO05D009140 1.6e-19 101.7 174 36.8
CsaV3_4G012080 Cucumis sativus L. HOM05D000246 ORTHO05D009140 1.8e-18 98.2 78 59.0
MELO3C008835.2 Cucumis melo HOM05D000246 ORTHO05D009140 5.6e-17 93.2 70 57.1
Cre12.g490150 Chlamydomonas reinhardtii HOM05D000246 ORTHO05D009140 6.0e-11 73.2 166 33.1
CsaV3_4G012070 Cucumis sativus L. HOM05D000246 ORTHO05D172834 1.4e-07 62.0 75 44.0
Zm00001eb239640 Zea mays HOM05D000246 ORTHO05D009140 1.2e-06 58.9 41 63.4
Lsat_1_v5_gn_5_105701 Lactuca sativa HOM05D000246 ORTHO05D005396 3.4e-06 57.4 198 26.3


User provided reference genes

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