Gene: vmacro02858

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro02858
  • Transcript Identifier vmacro02858-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 6022265-6033233 : negative

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro02858_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to recQ: ATP-dependent DNA helicase RecQ (Pasteurella multocida (strain Pm70) OX=272843)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0044237
IEA
InterProcellular metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
InterProhelicase activity
GO:0000166
IEA
InterPronucleotide binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR018982 RQC domain
IPR044876 HRDC domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR001650 Helicase, C-terminal
IPR002121 HRDC domain
IPR011545 DEAD/DEAH box helicase domain
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR029491 Helicase Helix-turn-helix domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR010997 HRDC-like superfamily
Mapman id Description
35.1 not assigned.annotated