Gene: Pp3c12_1610

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_1610
  • Transcript Identifier Pp3c12_1610V3.2
  • Gene Type Coding gene
  • Location Chr12 : 1468088-1475406 : positive

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_1610V3.2
  • pacid 32973447
  • alias Phypa_234221
  • alias Phpat.012G003700
  • alias Pp1s128_34V6
  • uniprot A0A2K1JP29

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
GOA Databasecellular metabolic process
GO:0044237
IEA
InterProcellular metabolic process
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0032508
IBA
GOA DatabaseDNA duplex unwinding
GO:0006310
IBA
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0006281
IBA
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006268
IBA
GOA DatabaseDNA unwinding involved in DNA replication
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043138
IBA
IEA
GOA Database3'-5' DNA helicase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0009378
IBA
GOA Databasefour-way junction helicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003678
IEA
GOA DatabaseDNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005694
IBA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR002121 HRDC domain
IPR018982 RQC domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR029491 Helicase Helix-turn-helix domain
IPR001650 Helicase, C-terminal
IPR036390 Winged helix DNA-binding domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR010997 HRDC-like superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR044876 HRDC domain superfamily
Mapman id Description
35.1 not assigned.annotated