Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 3.4e-40 167.9 88 100.0
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.1e-38 162.9 88 96.6
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 6.7e-36 153.7 88 92.0
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 4.9e-31 137.5 87 82.8
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.1e-30 136.3 87 81.6
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.9e-30 135.6 86 86.0
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 5.6e-27 124.0 85 78.8
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 4.6e-21 104.4 84 69.0
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.3e-20 102.8 86 66.3
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.3e-20 102.1 87 63.2
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 2.3e-20 102.1 86 66.3
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 8.7e-20 100.1 87 64.4
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 4.3e-19 97.8 87 62.1
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 5.7e-19 97.4 87 62.1
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 9.7e-19 96.7 85 65.9
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.4e-14 82.8 75 64.0
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 8.2e-10 67.0 60 58.3
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 1.4e-09 66.2 89 48.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.8e-09 65.9 88 53.4
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 5.3e-09 64.3 91 46.2
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 9.1e-09 63.5 63 57.1
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 9.1e-09 63.5 72 54.2
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.5e-08 62.8 76 44.7
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.5e-08 62.8 54 59.3
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 1.5e-08 62.8 91 45.1
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.0e-08 62.4 63 55.6
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 2.6e-08 62.0 89 50.6
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 4.5e-08 61.2 54 63.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.5e-08 61.2 92 45.7
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 5.9e-08 60.8 76 44.7
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 5.9e-08 60.8 49 61.2
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 7.7e-08 60.5 68 51.5
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 1.0e-07 60.1 49 61.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.7e-07 59.3 36 83.3
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.7e-07 59.3 37 73.0
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 1.7e-07 59.3 75 49.3
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.7e-07 59.3 58 51.7
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.7e-07 59.3 92 44.6
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.2e-07 58.9 83 50.6
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.2e-07 58.9 83 50.6
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 2.2e-07 58.9 75 48.0
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.2e-07 58.9 65 56.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 2.9e-07 58.5 49 61.2
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.9e-07 58.5 91 41.8
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.9e-07 58.5 91 41.8
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 3.8e-07 58.2 77 49.4
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 5.0e-07 57.8 34 79.4
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 5.0e-07 57.8 95 45.3
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 5.0e-07 57.8 73 52.1
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 5.0e-07 57.8 47 63.8
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 6.5e-07 57.4 34 79.4
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.5e-07 57.4 34 76.5
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.5e-07 57.4 34 79.4
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.5e-07 57.4 75 44.0
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 8.5e-07 57.0 41 68.3
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 8.5e-07 57.0 84 47.6
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.1e-06 56.6 71 56.3
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-06 56.6 75 42.7
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 1.4e-06 56.2 67 50.7
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.4e-06 56.2 59 55.9
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.4e-06 56.2 67 50.7
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.4e-06 56.2 72 50.0
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.9e-06 55.8 81 43.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.9e-06 55.8 76 43.4
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 1.9e-06 55.8 80 47.5
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 1.9e-06 55.8 72 50.0
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.5e-06 55.5 68 48.5
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 3.2e-06 55.1 58 55.2
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.2e-06 54.7 76 43.4
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.5e-06 54.3 37 75.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.5e-06 54.3 37 75.7
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 7.2e-06 53.9 91 41.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 7.2e-06 53.9 72 48.6
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 9.4e-06 53.5 36 72.2


User provided reference genes

Program Settings