Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33013 Trifolium pratense HOM05D009226 ORTHO05D010767 6.5e-88 327.4 171 100.0
TPR.G15912 Trifolium pratense HOM05D009226 ORTHO05D010767 1.2e-60 236.9 149 85.2
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.3e-43 180.3 147 65.3
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.9e-43 178.3 149 63.8
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 9.9e-36 154.1 140 61.4
Ca_02603_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.1e-33 146.4 138 60.1
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 5.1e-32 141.7 161 52.8
Medtr8g040975 Medicago truncatula HOM05D009226 ORTHO05D010767 8.7e-32 141.0 128 60.2
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 1.5e-31 140.2 161 52.2
Medtr5g048720 Medicago truncatula HOM05D009226 ORTHO05D010767 1.9e-31 139.8 126 58.7
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 6.4e-27 124.8 132 56.8
Ca_19080_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.1e-23 114.0 98 62.2
Psat0s1103g0040 Pisum sativum HOM05D009226 ORTHO05D010767 9.6e-23 110.9 112 57.1
Ca_25752_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.8e-22 109.4 102 60.8
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-21 107.1 130 52.3
Ca_14409_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.4e-21 107.1 107 57.0
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 4.0e-21 105.5 137 45.3
Medtr8g057120 Medicago truncatula HOM05D000107 ORTHO05D000062 4.0e-21 105.5 107 55.1
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 2.0e-20 103.2 144 47.2
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 7.6e-20 101.3 146 45.2
Ca_02553_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.9e-19 98.6 91 64.8
Ca_03865_v3 Cicer arietinum L. HOM05D002644 ORTHO05D010767 1.4e-18 97.1 132 48.5
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-18 96.7 144 44.4
Medtr4g088560 Medicago truncatula HOM05D009226 ORTHO05D010767 1.0e-16 90.9 102 54.9
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-16 90.1 144 43.1
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 2.3e-16 89.7 138 40.6
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 6.7e-16 88.2 138 44.9
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 8.7e-16 87.8 137 40.9
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 7.4e-15 84.7 89 51.7
Ca_26542_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.3e-14 84.0 103 51.5
Ca_19703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.1e-14 83.2 111 48.6
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 2.8e-14 82.8 137 43.8
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 3.7e-14 82.4 177 37.9
TPR.G28307 Trifolium pratense HOM05D009226 ORTHO05D010767 2.6e-12 76.3 60 75.0
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 7.6e-12 74.7 149 32.9
Ca_03135_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.2e-11 73.2 76 56.6
Psat6g163120 Pisum sativum HOM05D009226 ORTHO05D010767 2.2e-11 73.2 112 44.6
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 2.9e-11 72.8 143 30.8
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 8.4e-11 71.2 95 38.9
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.9e-10 70.1 94 41.5
Ca_23003_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.1e-10 68.2 89 47.2
Ca_30084_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.1e-10 68.2 89 47.2
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 9.3e-10 67.8 174 28.7
Psat6g153520 Pisum sativum HOM05D009226 ORTHO05D010767 1.6e-09 67.0 122 40.2
Medtr4g014530 Medicago truncatula HOM05D009226 ORTHO05D010767 2.1e-09 66.6 70 62.9
Ca_20168_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 6.1e-09 65.1 101 44.6
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 6.1e-09 65.1 135 31.1
Ca_05048_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.0e-08 64.3 48 68.8
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.0e-08 64.3 167 29.3
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 1.8e-08 63.5 134 33.6
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.8e-08 63.5 131 31.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 3.9e-08 62.4 131 34.4
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 3.9e-08 62.4 131 34.4
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.9e-08 62.4 169 27.2
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 5.1e-08 62.0 136 30.1
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-08 62.0 103 35.0
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 6.7e-08 61.6 128 35.2
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 2.5e-07 59.7 142 30.3
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-07 59.7 93 36.6
Nn5g26964 Nelumbo nucifera HOM05D029553 ORTHO05D000385 2.5e-07 59.7 144 29.9
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 4.3e-07 58.9 139 28.8
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 5.7e-07 58.5 155 32.3
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 7.4e-07 58.2 88 37.5
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 9.7e-07 57.8 137 32.1
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 9.7e-07 57.8 139 27.3
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-06 57.4 141 31.2
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.3e-06 57.4 139 27.3
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-06 57.0 159 26.4
TAR636G2298 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.2e-06 56.6 101 35.6
A05p38910 Brassica napus HOM05D008309 ORTHO05D010308 3.7e-06 55.8 119 32.8
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.7e-06 55.8 135 29.6
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.7e-06 55.8 94 31.9
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.7e-06 55.8 131 27.5
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 4.8e-06 55.5 170 27.6
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 4.8e-06 55.5 159 25.2
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 8.2e-06 54.7 159 25.8
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 8.2e-06 54.7 120 32.5


User provided reference genes

Program Settings