Gene: AT1G40087
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G40087
- Transcript Identifier AT1G40087.1
- Gene Type Coding gene
- Location Chr1 : 14999762-15001868 : negative
Gene Family Information
- ID HOM05D008309
- #Genes/#Species 60/8
- Phylogenetic origin
- ID ORTHO05D010308
- #Genes/#Species 68/11
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G40087.1
- uniprot F4I6H5
Descriptions
- Description Plant transposase (Ptta/En/Spm family)
- Computational description Plant transposase (Ptta/En/Spm family); CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 227 Blast hits to 225 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process | |
| GO:0009409 | ISO | PLAZA Tree-based Orthology | response to cold | AT1G42700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004252 | Probable transposase, Ptta/En/Spm, plant |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |