Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 1.1e-119 433.3 220 100.0
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 2.7e-54 216.1 190 64.7
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 1.7e-48 196.8 197 58.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 3.2e-47 192.6 191 59.7
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 2.0e-44 183.3 195 54.9
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 3.3e-44 182.6 188 56.4
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 5.7e-44 181.8 191 55.5
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 7.5e-44 181.4 195 54.4
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 4.8e-43 178.7 191 57.1
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 4.1e-42 175.6 191 52.9
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 7.0e-42 174.9 192 54.7
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 9.1e-42 174.5 197 52.3
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 3.5e-41 172.6 190 55.8
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 4.5e-33 145.6 158 54.4
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 8.5e-32 141.4 198 45.5
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.1e-31 141.0 192 45.8
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 1.9e-31 140.2 154 52.6
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 1.9e-31 140.2 192 45.3
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 2.5e-31 139.8 192 45.3
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 3.2e-31 139.4 191 47.6
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 4.2e-31 139.0 192 44.3
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 9.5e-31 137.9 192 44.8
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 6.1e-30 135.2 192 43.8
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 3.0e-29 132.9 252 38.5
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 3.0e-29 132.9 198 43.4
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 4.0e-29 132.5 192 43.8
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 6.8e-29 131.7 198 43.9
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 6.8e-29 131.7 198 44.4
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.2e-28 131.0 192 44.8
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 2.0e-28 130.2 77 87.0
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 3.4e-28 129.4 191 44.0
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 3.4e-28 129.4 192 44.3
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 4.4e-28 129.0 192 41.7
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 5.7e-28 128.6 185 45.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 7.5e-28 128.3 192 42.7
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 9.8e-28 127.9 192 42.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 2.2e-27 126.7 181 43.1
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 2.2e-27 126.7 192 41.7
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.2e-27 126.7 187 42.8
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 3.7e-27 125.9 193 43.0
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.9e-27 125.6 195 41.5
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 6.3e-27 125.2 192 41.7
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.1e-26 124.4 192 42.2
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 1.1e-26 124.4 193 42.0
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 1.4e-26 124.0 192 41.7
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.4e-26 124.0 193 41.5
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.4e-26 124.0 191 42.9
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 1.8e-26 123.6 193 43.5
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 2.4e-26 123.2 192 43.2
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 2.4e-26 123.2 192 42.2
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.1e-26 122.5 192 44.3
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 5.4e-26 122.1 192 42.2
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 5.4e-26 122.1 188 41.5
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.4e-26 122.1 191 42.9
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 5.4e-26 122.1 192 41.1
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 5.4e-26 122.1 192 41.7
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 7.0e-26 121.7 198 40.4
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 1.2e-25 120.9 200 39.0
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 2.0e-25 120.2 191 40.8
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 2.7e-25 119.8 200 40.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 4.5e-25 119.0 179 41.9
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 5.9e-25 118.6 192 40.6
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 7.8e-25 118.2 192 40.6
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 2.9e-24 116.3 182 42.3
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 3.8e-24 115.9 183 40.4
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.8e-24 115.9 191 41.9
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.8e-24 115.9 191 42.4
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 6.6e-24 115.2 182 41.2
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 8.6e-24 114.8 172 43.0
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 8.6e-24 114.8 198 38.4
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 1.1e-23 114.4 172 41.9
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.9e-23 113.6 166 41.6
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.9e-23 113.6 203 38.9
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 3.3e-23 112.8 182 38.5
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 3.3e-23 112.8 182 41.2
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 5.6e-23 112.1 254 35.0
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 9.5e-23 111.3 179 39.7
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.2e-22 110.9 164 42.1
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.6e-22 110.5 163 44.2
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 2.1e-22 110.2 175 41.1
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 2.8e-22 109.8 175 40.6
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 2.8e-22 109.8 181 39.8
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 2.8e-22 109.8 198 37.9
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 4.7e-22 109.0 175 40.6
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 4.7e-22 109.0 181 40.3
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 8.0e-22 108.2 192 39.6
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 8.0e-22 108.2 163 41.7
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.0e-21 107.8 167 39.5
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.4e-21 107.5 174 40.2
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 1.4e-21 107.5 175 40.0
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.3e-21 106.7 175 40.0
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.3e-21 106.7 175 40.0
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.3e-21 106.7 205 37.6
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 6.8e-21 105.1 173 40.5
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 6.8e-21 105.1 198 37.9
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 2.0e-20 103.6 183 39.3
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 2.0e-20 103.6 198 36.4
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 4.4e-20 102.4 161 42.9
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 5.7e-20 102.1 139 46.0
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 1.7e-19 100.5 183 37.2
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 2.9e-19 99.8 167 37.7
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.9e-19 99.8 161 39.1
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 6.4e-19 98.6 192 37.0
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 6.4e-19 98.6 161 39.1
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.1e-18 97.8 166 38.0
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 3.2e-18 96.3 159 42.1
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 7.0e-18 95.1 147 40.1
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 9.2e-18 94.7 186 36.6
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.2e-18 94.7 123 44.7
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.2e-17 94.4 164 37.8
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 1.2e-17 94.4 189 33.9
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 4.4e-12 75.9 69 60.9
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 7.5e-12 75.1 149 37.6
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 1.3e-11 74.3 161 33.5
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 1.3e-11 74.3 116 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 4.9e-11 72.4 150 32.7
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.4e-10 70.9 74 52.7
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 1.9e-10 70.5 87 42.5
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 1.9e-10 70.5 87 42.5
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 7.0e-10 68.6 130 37.7
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.2e-10 68.2 125 36.0
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 1.6e-09 67.4 95 41.1
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.0e-08 64.7 125 33.6
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 1.0e-08 64.7 86 38.4
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 3.0e-08 63.2 140 33.6
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.6e-08 62.0 126 34.1
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.1e-07 61.2 102 39.2
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 1.1e-07 61.2 113 36.3
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.9e-07 60.5 132 31.1
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 2.5e-07 60.1 115 36.5
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 1.2e-06 57.8 54 59.3
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 2.1e-06 57.0 49 59.2
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 4.7e-06 55.8 115 33.0


User provided reference genes

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