Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29131 Trifolium pratense HOM05D000070 ORTHO05D006627 1.2e-89 333.2 179 100.0
TPR.G27666 Trifolium pratense HOM05D000070 ORTHO05D006627 6.2e-73 277.7 148 95.3
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 2.7e-68 262.3 148 87.8
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 7.6e-63 244.2 148 81.8
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 6.0e-60 234.6 148 79.7
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 1.8e-59 233.0 148 79.1
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 6.9e-56 221.1 150 75.3
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 1.6e-52 209.9 150 73.3
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 2.7e-52 209.1 151 71.5
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 1.8e-48 196.4 150 66.0
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 1.8e-48 196.4 150 67.3
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 1.0e-46 190.7 150 64.0
TPR.G29502 Trifolium pratense HOM05D000070 ORTHO05D006627 3.8e-46 188.7 102 91.2
TPR.G20301 Trifolium pratense HOM05D000070 ORTHO05D006627 1.5e-42 176.8 93 94.6
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 3.7e-25 119.0 157 44.6
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 4.8e-25 118.6 155 42.6
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 2.0e-23 113.2 159 42.8
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 2.0e-23 113.2 159 44.0
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 2.2e-22 109.8 153 39.9
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 5.0e-22 108.6 158 39.2
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 8.5e-22 107.8 153 38.6
Gohir.D10G048401 Gossypium hirsutum HOM05D000070 ORTHO05D006627 1.5e-21 107.1 156 38.5
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 1.5e-21 107.1 156 38.5
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 2.5e-21 106.3 157 40.8
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 3.2e-21 105.9 154 41.6
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 5.5e-21 105.1 155 39.4
Hma1.2p1_1220F.1_g268000 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 1.2e-20 104.0 157 42.0
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 4.7e-20 102.1 152 40.8
Lj4A664T70 Lonicera japonica HOM05D000070 ORTHO05D006627 8.0e-20 101.3 158 38.0
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 1.0e-19 100.9 153 39.9
Cfa006373 Carpinus fangiana HOM05D000070 ORTHO05D006627 1.4e-19 100.5 152 39.5
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 1.8e-19 100.1 155 37.4
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 1.2e-18 97.4 153 37.3
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 2.0e-18 96.7 150 37.3
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 3.4e-18 95.9 158 37.3
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 7.5e-18 94.7 156 34.6
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 1.7e-17 93.6 153 37.3
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 4.8e-17 92.0 165 37.0
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 1.4e-16 90.5 155 36.8
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 1.8e-16 90.1 151 34.4
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 2.4e-16 89.7 152 38.2
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 3.1e-16 89.4 156 37.2
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 7.0e-16 88.2 156 36.5
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 7.0e-16 88.2 148 37.8
FAN26G0150 Fragaria x ananassa HOM05D000049 ORTHO05D006627 1.2e-15 87.4 152 37.5
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 2.0e-15 86.7 156 37.2
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 2.7e-15 86.3 152 37.5
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 7.7e-15 84.7 151 32.5
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 2.9e-14 82.8 156 34.0
CARHR204530 Cardamine hirsuta HOM05D000070 ORTHO05D006627 2.9e-14 82.8 155 34.2
Nitab4.5_0003485g0060 Nicotiana tabacum HOM05D000070 ORTHO05D006627 2.9e-14 82.8 149 30.9
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 8.5e-14 81.3 156 33.3
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 1.5e-13 80.5 157 33.8
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 1.5e-13 80.5 148 33.1
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 1.5e-13 80.5 155 34.2
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 1.9e-13 80.1 155 34.8
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.9e-13 80.1 149 30.9
SHI32171 Sapria himalayana HOM05D000070 ORTHO05D006627 1.9e-13 80.1 158 31.6
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 2.5e-13 79.7 155 34.2
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 4.2e-13 79.0 123 41.5
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 4.2e-13 79.0 149 30.9
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 5.5e-13 78.6 155 32.9
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 5.5e-13 78.6 154 33.1
Sed0014200 Sechium edule HOM05D000070 ORTHO05D006627 5.5e-13 78.6 148 29.1
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 1.2e-12 77.4 156 31.4
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 1.6e-12 77.0 160 35.0
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 2.1e-12 76.6 155 32.3
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 2.1e-12 76.6 148 32.4
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 2.7e-12 76.3 156 34.0
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 1.0e-11 74.3 159 30.2
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 2.3e-11 73.2 155 32.3
Sc07g0007670 Simmondsia chinensis HOM05D000070 ORTHO05D006627 2.3e-11 73.2 153 31.4
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 3.0e-11 72.8 157 28.7
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 5.2e-11 72.0 151 33.1
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 1.5e-10 70.5 160 31.9
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 2.6e-10 69.7 159 35.2
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 5.7e-10 68.6 152 32.2
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 1.1e-08 64.3 153 30.7
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 3.1e-08 62.8 90 37.8
SGA_v2.0_scaffold52G18907 Striga asiatica HOM05D000070 ORTHO05D006627 3.1e-08 62.8 154 31.2
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 5.4e-08 62.0 149 26.2
SalBow7G2869 Salvia bowleyana HOM05D000070 ORTHO05D006627 9.1e-08 61.2 155 28.4
FAN16G1763 Fragaria x ananassa HOM05D000070 ORTHO05D006627 1.2e-07 60.8 92 39.1
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 1.6e-07 60.5 102 33.3


User provided reference genes

Program Settings