Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 7.2e-92 340.5 166 100.0
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 2.6e-73 278.9 150 90.7
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 6.4e-72 274.2 146 91.8
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 5.4e-71 271.2 150 88.0
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.3e-68 261.9 150 82.7
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 4.3e-68 261.5 150 82.7
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 4.3e-68 261.5 150 84.0
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 4.3e-68 261.5 150 82.7
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.6e-68 261.2 149 82.6
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 5.6e-68 261.2 150 84.7
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 5.6e-68 261.2 149 83.2
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 1.6e-67 259.6 150 82.7
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 2.1e-67 259.2 149 82.6
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 1.1e-66 256.9 150 82.7
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 1.4e-66 256.5 150 84.0
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.8e-66 256.1 151 80.8
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.3e-66 255.8 150 80.7
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 5.2e-66 254.6 151 81.5
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 6.8e-66 254.2 150 80.7
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 6.8e-66 254.2 150 80.7
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.2e-65 253.4 150 80.7
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 1.5e-65 253.1 149 81.2
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.6e-65 252.3 150 80.0
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 2.6e-65 252.3 150 80.7
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 3.4e-65 251.9 150 80.0
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 3.4e-65 251.9 152 79.6
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 3.4e-65 251.9 149 80.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 4.4e-65 251.5 149 81.2
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 4.4e-65 251.5 150 80.7
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 7.5e-65 250.8 150 80.0
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 9.9e-65 250.4 150 79.3
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 9.9e-65 250.4 152 78.3
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.3e-64 250.0 153 77.8
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.7e-64 249.6 149 79.9
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.7e-64 249.6 149 79.9
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.7e-64 249.6 149 81.2
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.7e-64 249.6 150 79.3
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 2.9e-64 248.8 153 77.1
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 2.9e-64 248.8 150 80.7
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 3.7e-64 248.4 152 78.9
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 4.9e-64 248.1 150 78.7
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 4.9e-64 248.1 150 79.3
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 4.9e-64 248.1 150 80.0
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 4.9e-64 248.1 150 79.3
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 6.4e-64 247.7 151 78.1
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 6.4e-64 247.7 150 79.3
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 8.3e-64 247.3 153 75.8
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 8.3e-64 247.3 150 79.3
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 8.3e-64 247.3 150 79.3
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.1e-63 246.9 149 78.5
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.1e-63 246.9 150 78.0
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 1.1e-63 246.9 150 80.0
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.1e-63 246.9 150 80.0
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.4e-63 246.5 149 79.2
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 1.4e-63 246.5 148 80.4
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 1.9e-63 246.1 153 75.8
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.9e-63 246.1 153 75.8
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.9e-63 246.1 150 78.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.4e-63 245.7 150 79.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 3.2e-63 245.4 149 79.9
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 3.2e-63 245.4 150 78.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 3.2e-63 245.4 150 78.7
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.4e-63 244.6 150 78.0
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.4e-63 244.6 150 78.0
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 5.4e-63 244.6 150 78.7
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 7.1e-63 244.2 150 78.7
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 7.1e-63 244.2 153 75.2
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 7.1e-63 244.2 153 75.2
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 7.1e-63 244.2 150 79.3
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 9.2e-63 243.8 153 75.2
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 1.2e-62 243.4 150 76.7
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.2e-62 243.4 149 79.9
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.2e-62 243.4 150 77.3
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 2.7e-62 242.3 153 75.8
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 3.5e-62 241.9 150 78.7
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 3.5e-62 241.9 150 77.3
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 3.5e-62 241.9 149 79.2
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 4.6e-62 241.5 153 74.5
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 4.6e-62 241.5 149 75.8
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 7.8e-62 240.7 150 77.3
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 1.7e-61 239.6 150 75.3
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 2.3e-61 239.2 149 77.9
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 2.3e-61 239.2 150 78.0
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 3.9e-61 238.4 150 76.0
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 5.1e-61 238.0 150 76.0
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 8.6e-61 237.3 136 81.6
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 8.6e-61 237.3 146 76.0
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 1.1e-60 236.9 150 76.0
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 1.1e-60 236.9 150 75.3
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.5e-60 236.5 150 75.3
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.9e-60 236.1 147 76.9
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 4.3e-60 235.0 150 72.7
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 1.6e-59 233.0 150 74.7
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 2.8e-59 232.3 150 76.0
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 6.2e-59 231.1 150 75.3
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 8.1e-59 230.7 150 72.7
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 8.9e-58 227.3 145 76.6
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 2.2e-56 222.6 150 74.7
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 2.2e-56 222.6 150 74.7
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 2.9e-56 222.2 146 74.7
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 2.9e-56 222.2 149 71.8
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 2.9e-48 195.7 119 77.3
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 6.4e-48 194.5 111 81.1
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 8.4e-48 194.1 143 65.0
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.6e-46 189.9 152 60.5
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 5.1e-45 184.9 159 55.3
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 6.0e-38 161.4 162 53.7
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.9e-36 156.4 141 52.5
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.4e-31 140.2 78 80.8
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 4.8e-27 125.2 125 48.0
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 3.5e-22 109.0 54 94.4
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 3.3e-20 102.4 59 74.6
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 3.6e-14 82.4 47 78.7
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 6.5e-08 61.6 52 59.6


User provided reference genes

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