Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27052 Trifolium pratense HOM05D006258 ORTHO05D007961 9.2e-68 260.0 123 100.0
TPR.G15324 Trifolium pratense HOM05D006258 ORTHO05D007961 2.3e-42 175.6 119 73.9
Ca_02705_v3 Cicer arietinum L. HOM05D006258 ORTHO05D007961 1.7e-37 159.5 119 65.5
Medtr2g058580 Medicago truncatula HOM05D006258 ORTHO05D007961 1.7e-37 159.5 119 65.5
Psat2g031800 Pisum sativum HOM05D006258 ORTHO05D007961 3.2e-36 155.2 119 65.5
Lj6g0013743 Lotus japonicus HOM05D006258 ORTHO05D007961 7.9e-35 150.6 119 62.2
arahy.Tifrunner.gnm1.ann1.FEEJ53 Arachis hypogaea HOM05D006258 ORTHO05D007961 6.7e-34 147.5 119 59.7
arahy.Tifrunner.gnm1.ann1.MTM7TL Arachis hypogaea HOM05D006258 ORTHO05D007961 9.6e-33 143.7 119 58.0
Lalb_Chr06g0172791 Lupinus albus HOM05D006258 ORTHO05D007961 2.1e-32 142.5 119 58.8
VMungo0464G1023 Vigna mungo HOM05D006258 ORTHO05D007961 4.5e-30 134.8 119 55.5
CANSAT11G0498 Cannabis sativa HOM05D006258 ORTHO05D007961 2.2e-29 132.5 119 52.9
Dinv42824 Davidia involucrata HOM05D006258 ORTHO05D007961 2.2e-29 132.5 119 54.6
Dinv43276 Davidia involucrata HOM05D006258 ORTHO05D007961 2.2e-29 132.5 119 54.6
TAR625G0708 Trochodendron aralioides HOM05D006258 ORTHO05D007961 2.2e-29 132.5 119 55.5
Phvul.004G145400 Phaseolus vulgaris HOM05D006258 ORTHO05D007961 2.9e-29 132.1 119 55.5
Actinidia20935 Actinidia chinensis HOM05D006258 ORTHO05D007961 6.5e-29 131.0 119 53.8
EL10Ac8g18915 Beta vulgaris HOM05D006258 ORTHO05D007961 1.1e-28 130.2 118 53.4
PGR142G1283 Punica granatum HOM05D006258 ORTHO05D007961 1.4e-28 129.8 119 52.1
PGSC0003DMG400011207 Solanum tuberosum HOM05D006258 ORTHO05D007961 1.4e-28 129.8 118 53.4
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.9e-28 129.4 119 51.3
Prupe.7G266300 Prunus persica HOM05D006258 ORTHO05D007961 2.5e-28 129.0 119 52.1
Solyc07g005950.4 Solanum lycopersicum HOM05D006258 ORTHO05D007961 3.2e-28 128.6 118 52.5
Sopen07g002080 Solanum pennellii HOM05D006258 ORTHO05D007961 3.2e-28 128.6 118 52.5
Nn8g40038 Nelumbo nucifera HOM05D006258 ORTHO05D007961 4.2e-28 128.3 119 52.9
FvH4_1g00580 Fragaria vesca HOM05D006258 ORTHO05D007961 5.5e-28 127.9 119 49.6
FAN26G2355 Fragaria x ananassa HOM05D006258 ORTHO05D007961 5.5e-28 127.9 119 49.6
FAN28G2306 Fragaria x ananassa HOM05D006258 ORTHO05D007961 5.5e-28 127.9 119 49.6
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 7.1e-28 127.5 119 52.9
Eucgr.C00243 Eucalyptus grandis HOM05D006258 ORTHO05D007961 9.3e-28 127.1 119 50.4
Haze_19146 Corylus avellana HOM05D006258 ORTHO05D007961 1.2e-27 126.7 119 54.6
QL02p094105 Quercus lobata HOM05D006258 ORTHO05D007961 1.2e-27 126.7 119 52.1
Aqoxy7G02393 Aquilegia oxysepala HOM05D006258 ORTHO05D007961 2.7e-27 125.6 119 50.4
GSVIVG01014050001 Vitis vinifera HOM05D006258 ORTHO05D007961 2.7e-27 125.6 119 51.3
COL.COLO4_05707 Corchorus olitorius HOM05D006258 ORTHO05D007961 4.6e-27 124.8 119 51.3
Thecc.09G153300 Theobroma cacao HOM05D006258 ORTHO05D007961 4.6e-27 124.8 119 51.3
THA.LOC104811334 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 6.0e-27 124.4 119 47.9
THA.LOC109116244 Tarenaya hassleriana HOM05D006258 ORTHO05D007961 6.0e-27 124.4 119 47.9
CARHR238690 Cardamine hirsuta HOM05D006258 ORTHO05D007961 7.9e-27 124.0 117 49.6
Ciclev10007430m.g Citrus clementina HOM05D006258 ORTHO05D007961 7.9e-27 124.0 119 49.6
Oeu055282.2 Olea europaea HOM05D006258 ORTHO05D007961 7.9e-27 124.0 119 49.6
MBI15_g27201_MAGBIO Magnolia biondii HOM05D006258 ORTHO05D007961 1.0e-26 123.6 119 50.4
CiPaw.16G107200 Carya illinoinensis HOM05D006258 ORTHO05D007961 1.3e-26 123.2 118 52.5
AUR62028365 Chenopodium quinoa HOM05D006258 ORTHO05D007961 1.3e-26 123.2 119 49.6
Duzib168G2382 Durio zibethinus HOM05D006258 ORTHO05D007961 1.3e-26 123.2 119 49.6
Lj9P721T44 Lonicera japonica HOM05D006258 ORTHO05D007961 1.3e-26 123.2 119 52.1
Migut.J01390 Erythranthe guttata HOM05D006258 ORTHO05D007961 1.8e-26 122.9 118 49.2
Gohir.D08G099500 Gossypium hirsutum HOM05D006258 ORTHO05D007961 1.8e-26 122.9 119 49.6
Sc08g0004870 Simmondsia chinensis HOM05D006258 ORTHO05D007961 1.8e-26 122.9 119 47.1
Atru.chr7.3 Acer truncatum HOM05D006258 ORTHO05D007961 2.3e-26 122.5 119 50.4
Glyma.04G155800 Glycine max HOM05D006258 ORTHO05D007961 2.3e-26 122.5 109 56.9
Nitab4.5_0003759g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 2.3e-26 122.5 118 49.2
Nitab4.5_0006810g0010 Nicotiana tabacum HOM05D006258 ORTHO05D007961 2.3e-26 122.5 118 49.2
Potri.006G005100 Populus trichocarpa HOM05D006258 ORTHO05D007961 3.9e-26 121.7 118 51.7
Sed0027468 Sechium edule HOM05D006258 ORTHO05D007961 3.9e-26 121.7 118 50.0
AUR62025364 Chenopodium quinoa HOM05D006258 ORTHO05D007961 5.1e-26 121.3 119 48.7
DCAR_020087 Daucus carota HOM05D006258 ORTHO05D007961 5.1e-26 121.3 119 51.3
Nitab4.5_0006335g0030 Nicotiana tabacum HOM05D006258 ORTHO05D007961 5.1e-26 121.3 118 47.5
CAN.G1610.1 Capsicum annuum HOM05D006258 ORTHO05D007961 6.7e-26 120.9 118 50.8
Thhalv10024344m.g Eutrema salsugineum HOM05D006258 ORTHO05D007961 6.7e-26 120.9 117 47.9
Gorai.004G107200 Gossypium raimondii HOM05D006258 ORTHO05D007961 6.7e-26 120.9 119 48.7
MD15G1148600 Malus domestica HOM05D006258 ORTHO05D007961 6.7e-26 120.9 118 49.2
SGA_v2.0_scaffold45G17009 Striga asiatica HOM05D006258 ORTHO05D007961 6.7e-26 120.9 119 47.1
Aa31LG2G19560 Aethionema arabicum HOM05D006258 ORTHO05D007961 8.7e-26 120.6 117 48.7
MELO3C010202.2 Cucumis melo HOM05D006258 ORTHO05D007961 8.7e-26 120.6 118 50.8
CsaV3_1G029170 Cucumis sativus L. HOM05D006258 ORTHO05D007961 1.1e-25 120.2 118 50.8
SalBow1G4688 Salvia bowleyana HOM05D006258 ORTHO05D007961 1.1e-25 120.2 119 47.9
BcaNung03436 Brassica carinata HOM05D006258 ORTHO05D007961 1.5e-25 119.8 117 47.9
Gohir.A08G088300 Gossypium hirsutum HOM05D006258 ORTHO05D007961 1.5e-25 119.8 119 48.7
Ah.09g228710 Amaranthus hybridus HOM05D006258 ORTHO05D007961 1.9e-25 119.4 119 50.4
AL7G21300 Arabidopsis lyrata HOM05D006258 ORTHO05D007961 1.9e-25 119.4 117 47.9
Rhsim01G0025000 Rhododendron simsii HOM05D006258 ORTHO05D007961 2.5e-25 119.0 119 47.9
Sp7g28700 Schrenkiella parvula HOM05D006258 ORTHO05D007961 2.5e-25 119.0 142 43.0
PSO017G5475 Papaver somniferum HOM05D006258 ORTHO05D007961 3.3e-25 118.6 119 47.9
PSO170G6770 Papaver somniferum HOM05D006258 ORTHO05D007961 3.3e-25 118.6 119 47.9
Peaxi162Scf01313g10029 Petunia axillaris HOM05D006258 ORTHO05D007961 5.7e-25 117.9 118 46.6
HanXRQChr03g0066041 Helianthus annuus HOM05D006258 ORTHO05D007961 9.7e-25 117.1 119 47.1
MSTRG.19663 Avicennia marina HOM05D006258 ORTHO05D007961 1.3e-24 116.7 119 47.1
Carub.0007s0974 Capsella rubella HOM05D006258 ORTHO05D007961 1.6e-24 116.3 117 46.2
Lsat_1_v5_gn_7_49581 Lactuca sativa HOM05D006258 ORTHO05D007961 1.6e-24 116.3 121 47.1
BraA01t00683Z Brassica rapa HOM05D006258 ORTHO05D007961 2.2e-24 115.9 117 47.0
TWI63G1632 Tripterygium wilfordii HOM05D006258 ORTHO05D007961 3.7e-24 115.2 119 47.1
Rhsim01G0024600 Rhododendron simsii HOM05D006258 ORTHO05D007961 4.8e-24 114.8 118 45.8
AT4G30825 Arabidopsis thaliana HOM05D006258 ORTHO05D007961 6.3e-24 114.4 117 46.2
Manes.14G112800 Manihot esculenta HOM05D006258 ORTHO05D007961 6.3e-24 114.4 118 48.3
A01p07350 Brassica napus HOM05D006258 ORTHO05D007961 8.2e-24 114.0 117 46.2
BcaC09g51872 Brassica carinata HOM05D006258 ORTHO05D007961 1.1e-23 113.6 117 45.3
C01p08100 Brassica napus HOM05D006258 ORTHO05D007961 4.1e-23 111.7 117 46.2
BolC1t00798H Brassica oleracea HOM05D006258 ORTHO05D007961 1.2e-22 110.2 117 44.4
CDE02G4246 Ceratophyllum demersum HOM05D006258 ORTHO05D007961 3.4e-22 108.6 120 47.5
Zm00001eb414570 Zea mays HOM05D006258 ORTHO05D007961 1.4e-20 103.2 119 41.2
Os09g0423300 Oryza sativa ssp. japonica HOM05D006258 ORTHO05D007961 7.2e-20 100.9 119 40.3
CSS0048528 Camellia sinensis var. sinensis HOM05D006258 ORTHO05D007961 1.2e-19 100.1 120 45.8
Sabra06G0004300 Salix brachista HOM05D006258 ORTHO05D007961 2.7e-19 99.0 99 49.5
HPP92_018549 Vanilla planifolia HOM05D006258 ORTHO05D007961 6.1e-19 97.8 119 41.2
ATR0739G146 Amborella trichopoda HOM05D006258 ORTHO05D007961 5.1e-18 94.7 119 39.5
Sc08g0004880 Simmondsia chinensis HOM05D006258 ORTHO05D007961 5.7e-17 91.3 55 67.3
SEGI_25615 Sequoiadendron giganteum HOM05D006258 ORTHO05D007961 8.2e-16 87.4 68 50.0
Pp3c16_4140 Physcomitrium patens HOM05D006258 ORTHO05D007961 6.7e-10 67.8 71 36.6
AagrBONN_evm.TU.Sc2ySwM_348.3 Anthoceros agrestis HOM05D006258 ORTHO05D007961 8.8e-10 67.4 99 30.3
Cpa.g.sc199.25 Carica papaya HOM05D006258 ORTHO05D007961 1.5e-09 66.6 119 32.8
AagrBONN_evm.TU.Sc2ySwM_301.2 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.3e-08 63.5 73 37.0
AagrBONN_evm.TU.Sc2ySwM_348.6 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.3e-08 63.5 73 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1493__1494 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.3e-08 63.5 73 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1519 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.3e-08 63.5 73 37.0
AagrBONN_evm.TU.Sc2ySwM_82.5 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.3e-08 63.5 73 37.0
AagrBONN_evm.TU.Sc2ySwM_142.3 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.7e-08 63.2 73 37.0
AagrBONN_evm.TU.Sc2ySwM_143.1 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.7e-08 63.2 73 37.0
AagrBONN_evm.TU.Sc2ySwM_348.8 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.7e-08 63.2 73 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1521 Anthoceros agrestis HOM05D006258 ORTHO05D007961 1.7e-08 63.2 73 37.0
Mapoly0036s0017 Marchantia polymorpha HOM05D006258 ORTHO05D007961 2.2e-08 62.8 70 37.1
Pp3c5_2530 Physcomitrium patens HOM05D006258 ORTHO05D007961 4.8e-08 61.6 61 41.0
CsaV3_7G026080 Cucumis sativus L. HOM05D001779 ORTHO05D001753 1.5e-06 56.6 93 29.0
THA.LOC104802670 Tarenaya hassleriana HOM05D001779 ORTHO05D001753 2.6e-06 55.8 90 30.0
Thecc.01G224400 Theobroma cacao HOM05D001779 ORTHO05D001753 2.6e-06 55.8 93 28.0
ClCG09G008970 Citrullus lanatus HOM05D001779 ORTHO05D001753 3.4e-06 55.5 93 29.0
Duzib138G0054 Durio zibethinus HOM05D001779 ORTHO05D001753 4.5e-06 55.1 93 26.9
Gohir.A11G138700 Gossypium hirsutum HOM05D001779 ORTHO05D001753 5.9e-06 54.7 93 28.0
Gorai.007G155400 Gossypium raimondii HOM05D001779 ORTHO05D001753 5.9e-06 54.7 93 28.0


User provided reference genes

Program Settings