Gene: Pp3c16_4140

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_4140
  • Transcript Identifier Pp3c16_4140V3.2
  • Gene Type Coding gene
  • Location Chr16 : 2799902-2803566 : positive

Gene Family Information

  • ID HOM05D006258
  • #Genes/#Species 127/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_4140V3.2
  • pacid 32985890
  • alias Phpat.016G015800
  • alias Pp1s127_120V6
  • alias Phypa_216358
  • uniprot A0A2K1J739

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0000079
IBA
GOA Databaseregulation of cyclin-dependent protein serine/threonine kinase activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT4G30825
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G30825

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005675
IBA
GOA Databasetranscription factor TFIIH holo complex
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G30825

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated