Gene: Sopen07g002080

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g002080
  • Transcript Identifier Sopen07g002080.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 1022188-1025001 : negative

Gene Family Information

  • ID HOM05D006258
  • #Genes/#Species 127/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g002080.1

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: cell cycle | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Cdk-activating kinase assembly factor (MAT1) | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT4G30825
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G30825

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G30825

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated