Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27024 Trifolium pratense HOM05D002535 ORTHO05D006846 2.0e-83 312.4 157 100.0
Ca_05547_v3 Cicer arietinum L. HOM05D002535 ORTHO05D006846 8.2e-45 184.1 108 85.2
Medtr5g068600 Medicago truncatula HOM05D002535 ORTHO05D006846 5.5e-41 171.4 108 81.5
LjContig00155g0000379 Lotus japonicus HOM05D002535 ORTHO05D006846 4.7e-40 168.3 108 77.8
Lalb_Chr10g0103021 Lupinus albus HOM05D002535 ORTHO05D006846 7.4e-38 161.0 108 75.0
Glyma.02G221300 Glycine max HOM05D002535 ORTHO05D006846 4.1e-36 155.2 108 72.2
Glyma.14G188900 Glycine max HOM05D002535 ORTHO05D006846 5.3e-36 154.8 108 72.2
Phvul.008G188400 Phaseolus vulgaris HOM05D002535 ORTHO05D006846 9.1e-36 154.1 108 73.1
TPR.G15887 Trifolium pratense HOM05D002535 ORTHO05D006846 2.7e-32 142.5 78 88.5
QL09p006081 Quercus lobata HOM05D002535 ORTHO05D006846 7.0e-28 127.9 108 59.3
arahy.Tifrunner.gnm1.ann1.HMHY7M Arachis hypogaea HOM05D002535 ORTHO05D006846 7.7e-27 124.4 108 62.0
GSVIVG01038675001 Vitis vinifera HOM05D002535 ORTHO05D006846 7.7e-27 124.4 108 56.5
arahy.Tifrunner.gnm1.ann1.DLGH4W Arachis hypogaea HOM05D002535 ORTHO05D006846 2.2e-26 122.9 108 61.1
TAR375G1062 Trochodendron aralioides HOM05D002535 ORTHO05D006846 1.5e-25 120.2 110 55.5
Prupe.2G321600 Prunus persica HOM05D002535 ORTHO05D006846 1.9e-25 119.8 108 52.8
Duzib084G0662 Durio zibethinus HOM05D002535 ORTHO05D006846 5.5e-25 118.2 108 56.5
Atru.chr12.2530 Acer truncatum HOM05D002535 ORTHO05D006846 1.6e-24 116.7 109 59.6
Sabra12G0000700 Salix brachista HOM05D002535 ORTHO05D006846 2.7e-24 115.9 109 53.2
Sabra12G0007000 Salix brachista HOM05D002535 ORTHO05D006846 2.7e-24 115.9 109 53.2
CiPaw.05G208400 Carya illinoinensis HOM05D002535 ORTHO05D006846 4.7e-24 115.2 108 53.7
Atru.chr12.2507 Acer truncatum HOM05D002535 ORTHO05D006846 6.1e-24 114.8 107 59.8
Haze_00328 Corylus avellana HOM05D002535 ORTHO05D006846 6.1e-24 114.8 108 52.8
FvH4_7g33260 Fragaria vesca HOM05D002535 ORTHO05D006846 6.1e-24 114.8 106 51.9
FAN03G0390 Fragaria x ananassa HOM05D002535 ORTHO05D006846 6.1e-24 114.8 106 51.9
CSS0030602 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 1.8e-23 113.2 108 53.7
CSS0041054 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 1.8e-23 113.2 108 53.7
COL.COLO4_14395 Corchorus olitorius HOM05D002535 ORTHO05D006846 1.8e-23 113.2 109 56.0
TWI39G1073 Tripterygium wilfordii HOM05D002535 ORTHO05D006846 1.8e-23 113.2 109 58.7
Cfa016132 Carpinus fangiana HOM05D002535 ORTHO05D006846 3.0e-23 112.5 108 51.9
Potri.012G005000 Populus trichocarpa HOM05D002535 ORTHO05D006846 3.0e-23 112.5 109 52.3
Manes.18G108000 Manihot esculenta HOM05D002535 ORTHO05D006846 4.0e-23 112.1 109 56.0
RcHm_v2.0_Chr1g0383251 Rosa chinensis HOM05D002535 ORTHO05D006846 4.0e-23 112.1 106 49.1
THA.LOC104825164 Tarenaya hassleriana HOM05D002535 ORTHO05D006846 5.2e-23 111.7 109 54.1
FAN01G2729 Fragaria x ananassa HOM05D002535 ORTHO05D006846 8.8e-23 110.9 106 49.1
Ciclev10018840m.g Citrus clementina HOM05D002535 ORTHO05D006846 2.0e-22 109.8 108 52.8
Cc01_g06440 Coffea canephora HOM05D002535 ORTHO05D006846 2.0e-22 109.8 108 51.9
Lj1C1030G8 Lonicera japonica HOM05D002535 ORTHO05D006846 2.0e-22 109.8 108 50.0
Gohir.A12G245000 Gossypium hirsutum HOM05D002535 ORTHO05D006846 3.4e-22 109.0 109 53.2
Thecc.03G211600 Theobroma cacao HOM05D002535 ORTHO05D006846 3.4e-22 109.0 109 56.0
Gohir.D12G245800 Gossypium hirsutum HOM05D002535 ORTHO05D006846 4.4e-22 108.6 109 53.2
Gorai.008G263400 Gossypium raimondii HOM05D002535 ORTHO05D006846 4.4e-22 108.6 109 53.2
MD07G1302400 Malus domestica HOM05D002535 ORTHO05D006846 4.4e-22 108.6 108 50.9
Actinidia08716 Actinidia chinensis HOM05D002535 ORTHO05D006846 2.2e-21 106.3 108 48.1
Hma1.2p1_0115F.1_g055690 Hydrangea macrophylla HOM05D002535 ORTHO05D006846 3.7e-21 105.5 108 53.7
Migut.F00161 Erythranthe guttata HOM05D002535 ORTHO05D006846 4.8e-21 105.1 108 50.9
ECA238G0251 Erigeron canadensis HOM05D002676 ORTHO05D006846 1.8e-20 103.2 133 47.4
Eucgr.K00458 Eucalyptus grandis HOM05D002535 ORTHO05D006846 1.8e-20 103.2 108 50.0
Sp6g16120 Schrenkiella parvula HOM05D002535 ORTHO05D006846 2.4e-20 102.8 113 49.6
BcaB05g22108 Brassica carinata HOM05D002535 ORTHO05D006846 3.1e-20 102.4 113 50.4
Oeu055378.1 Olea europaea HOM05D002535 ORTHO05D006846 4.1e-20 102.1 108 48.1
Lsat_1_v5_gn_2_5220 Lactuca sativa HOM05D002535 ORTHO05D006846 5.4e-20 101.7 134 46.3
Psat7g096080 Pisum sativum HOM05D002535 ORTHO05D006846 9.1e-20 100.9 66 81.8
Aa31LG3G9940 Aethionema arabicum HOM05D002535 ORTHO05D006846 1.6e-19 100.1 108 50.0
CARHR267280 Cardamine hirsuta HOM05D002535 ORTHO05D006846 1.6e-19 100.1 111 48.6
Rhsim03G0218100 Rhododendron simsii HOM05D002535 ORTHO05D006846 1.6e-19 100.1 108 47.2
ClCG07G009720 Citrullus lanatus HOM05D002535 ORTHO05D006846 2.7e-19 99.4 104 49.0
vmacro06471 Vaccinium macrocarpon HOM05D002535 ORTHO05D006846 3.5e-19 99.0 108 46.3
Sc19g0000400 Simmondsia chinensis HOM05D002535 ORTHO05D006846 5.9e-19 98.2 109 46.8
DCAR_010560 Daucus carota HOM05D002535 ORTHO05D006846 7.7e-19 97.8 108 47.2
Nn1g09652 Nelumbo nucifera HOM05D002535 ORTHO05D006846 7.7e-19 97.8 111 47.7
Thhalv10012724m.g Eutrema salsugineum HOM05D002535 ORTHO05D006846 1.0e-18 97.4 111 48.6
CANSAT21G0133 Cannabis sativa HOM05D002535 ORTHO05D006846 1.7e-18 96.7 108 50.0
CsaV3_4G009720 Cucumis sativus L. HOM05D002535 ORTHO05D006846 1.7e-18 96.7 104 51.0
PGR142G0839 Punica granatum HOM05D002535 ORTHO05D006846 1.7e-18 96.7 108 49.1
SalBow6G2866 Salvia bowleyana HOM05D002535 ORTHO05D006846 1.7e-18 96.7 112 47.3
HanXRQChr14g0452381 Helianthus annuus HOM05D002535 ORTHO05D006846 2.3e-18 96.3 131 45.0
MBI04_g09825_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D006846 2.3e-18 96.3 112 47.3
BcaC03g14353 Brassica carinata HOM05D002535 ORTHO05D006846 2.9e-18 95.9 113 46.9
C02p17660 Brassica napus HOM05D002535 ORTHO05D006846 2.9e-18 95.9 113 46.9
BolC2t07896H Brassica oleracea HOM05D002535 ORTHO05D006846 2.9e-18 95.9 113 46.9
Sed0019266 Sechium edule HOM05D002535 ORTHO05D006846 5.0e-18 95.1 104 47.1
Nitab4.5_0004582g0020 Nicotiana tabacum HOM05D002535 ORTHO05D006846 6.5e-18 94.7 108 46.3
unitig_748.g7357 Utricularia gibba HOM05D002535 ORTHO05D006846 6.5e-18 94.7 120 44.2
AL8G29210 Arabidopsis lyrata HOM05D002535 ORTHO05D006846 8.6e-18 94.4 111 48.6
A02p10580 Brassica napus HOM05D002535 ORTHO05D006846 8.6e-18 94.4 113 46.0
Peaxi162Scf01026g00257 Petunia axillaris HOM05D002535 ORTHO05D006846 8.6e-18 94.4 108 46.3
Aqoxy5G04389 Aquilegia oxysepala HOM05D002535 ORTHO05D006846 1.1e-17 94.0 111 45.9
CAN.G303.52 Capsicum annuum HOM05D002535 ORTHO05D006846 1.1e-17 94.0 108 46.3
AUR62005953 Chenopodium quinoa HOM05D002535 ORTHO05D006846 1.1e-17 94.0 109 44.0
Solyc03g080010.3 Solanum lycopersicum HOM05D002535 ORTHO05D006846 1.9e-17 93.2 108 45.4
Sopen03g021730 Solanum pennellii HOM05D002535 ORTHO05D006846 1.9e-17 93.2 108 45.4
BraA02t06123Z Brassica rapa HOM05D002535 ORTHO05D006846 2.5e-17 92.8 113 45.1
SGA_v2.0_scaffold44G16838 Striga asiatica HOM05D002535 ORTHO05D006846 2.5e-17 92.8 106 44.3
Nitab4.5_0000021g0180 Nicotiana tabacum HOM05D002535 ORTHO05D006846 5.5e-17 91.7 108 44.4
Carub.0008s1437 Capsella rubella HOM05D002535 ORTHO05D006846 7.2e-17 91.3 110 47.3
PSO063G0674 Papaver somniferum HOM05D002535 ORTHO05D006846 1.6e-16 90.1 111 44.1
PSO782G3476 Papaver somniferum HOM05D002535 ORTHO05D006846 4.7e-16 88.6 111 44.1
AT5G54090 Arabidopsis thaliana HOM05D002535 ORTHO05D006846 8.0e-16 87.8 111 46.8
EL10Ac3g05139 Beta vulgaris HOM05D002535 ORTHO05D006846 1.0e-15 87.4 130 44.6
Psat0s1274g0040 Pisum sativum HOM05D002535 ORTHO05D006846 1.0e-15 87.4 51 88.2
Ah.13g071000 Amaranthus hybridus HOM05D002535 ORTHO05D006846 4.0e-15 85.5 109 41.3
Hund21077 Selenicereus undatus HOM05D002535 ORTHO05D006846 6.8e-15 84.7 107 42.1
Zm00001eb220610 Zea mays HOM05D002535 ORTHO05D006846 8.9e-15 84.3 109 44.0
HPP92_007410 Vanilla planifolia HOM05D002535 ORTHO05D006846 3.4e-14 82.4 111 42.3
VMungo0647G0390 Vigna mungo HOM05D002535 ORTHO05D006846 7.5e-14 81.3 51 82.4
VMungo0647G1626 Vigna mungo HOM05D002535 ORTHO05D006846 1.3e-13 80.5 57 63.2
MELO3C024845.2 Cucumis melo HOM05D002535 ORTHO05D006846 8.3e-13 77.8 104 43.3
Cpa.g.sc3.180 Carica papaya HOM05D002535 ORTHO05D006846 7.8e-11 71.2 76 47.4
ATR0579G153 Amborella trichopoda HOM05D002535 ORTHO05D006846 2.3e-10 69.7 108 34.3
Dinv17281 Davidia involucrata HOM05D002535 ORTHO05D006846 6.6e-10 68.2 51 60.8
Os10g0509000 Oryza sativa ssp. japonica HOM05D002535 ORTHO05D006846 4.4e-06 55.5 95 33.7
Cfa012930 Carpinus fangiana HOM05D002535 ORTHO05D006846 5.8e-06 55.1 75 36.0


User provided reference genes

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