Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2477 Trifolium pratense HOM05D001734 ORTHO05D006943 4.3e-231 804.3 399 100.0
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 1.9e-191 672.5 399 82.7
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 2.6e-188 662.1 400 82.2
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 1.4e-173 613.2 428 77.8
Phvul.007G016800 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 3.1e-173 612.1 401 74.1
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 5.3e-173 611.3 400 74.0
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 3.2e-170 602.1 398 75.1
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 3.9e-168 595.1 405 72.8
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 3.3e-167 592.0 402 71.6
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 2.0e-148 529.6 404 66.1
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 1.0e-147 527.3 412 64.6
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 1.4e-141 506.9 391 64.2
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 1.8e-141 506.5 397 63.5
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 1.2e-140 503.8 423 60.3
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 5.9e-140 501.5 392 62.2
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 9.4e-138 494.2 396 59.8
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 9.4e-138 494.2 396 59.8
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 1.2e-137 493.8 428 59.6
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 2.1e-137 493.0 396 60.9
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 2.7e-137 492.7 419 58.2
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 4.7e-137 491.9 396 59.8
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 1.5e-135 486.9 407 59.5
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 2.0e-135 486.5 390 60.8
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 2.6e-135 486.1 390 60.8
Cpa.g.sc20.125 Carica papaya HOM05D001734 ORTHO05D006943 2.8e-134 482.6 408 57.8
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 5.4e-133 478.4 391 62.1
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 9.1e-133 477.6 396 58.8
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 3.5e-132 475.7 403 58.3
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 2.2e-131 473.0 395 58.5
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 2.9e-131 472.6 413 56.9
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 1.9e-130 469.9 392 58.7
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 1.2e-129 467.2 396 58.3
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 1.6e-129 466.8 396 58.3
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 1.6e-129 466.8 396 57.3
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 1.8e-128 463.4 396 57.8
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 5.2e-128 461.8 407 56.0
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 6.8e-128 461.5 407 56.5
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 4.4e-127 458.8 396 57.1
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 7.5e-127 458.0 413 55.2
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 1.2e-124 450.7 405 56.0
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 2.3e-123 446.4 396 55.8
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 2.9e-123 446.0 396 56.3
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 5.0e-123 445.3 397 54.9
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 2.8e-121 439.5 406 51.7
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 4.7e-121 438.7 405 55.1
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 1.4e-120 437.2 343 60.1
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 1.8e-120 436.8 407 52.6
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 3.0e-120 436.0 397 56.7
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 8.9e-120 434.5 397 56.4
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 2.0e-119 433.3 397 56.4
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 2.0e-119 433.3 390 54.6
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 9.8e-119 431.0 393 55.0
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 1.7e-118 430.3 393 55.0
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 2.9e-118 429.5 396 54.8
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 2.9e-118 429.5 394 53.6
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 1.4e-117 427.2 408 54.4
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 4.1e-117 425.6 389 55.8
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 9.2e-117 424.5 397 55.7
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 2.0e-116 423.3 394 54.3
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 4.6e-116 422.2 397 55.4
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 5.9e-116 421.8 424 52.4
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 6.6e-115 418.3 388 54.1
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 6.6e-115 418.3 406 50.7
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 8.6e-115 417.9 398 54.3
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 3.6e-113 412.5 403 53.3
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 1.0e-112 411.0 452 49.3
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 1.8e-112 410.2 396 53.3
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 4.0e-112 409.1 404 52.7
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 2.6e-111 406.4 421 51.3
Lj1g0005537 Lotus japonicus HOM05D001873 ORTHO05D001976 3.2e-109 399.4 334 60.5
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 1.1e-104 384.4 400 49.8
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 1.8e-104 383.6 401 49.9
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 1.8e-104 383.6 400 49.5
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 4.0e-104 382.5 386 50.8
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 4.0e-104 382.5 386 50.8
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 6.8e-104 381.7 399 50.4
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 8.9e-104 381.3 392 50.5
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 2.6e-103 379.8 386 51.8
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 3.4e-103 379.4 393 50.9
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 7.5e-103 378.3 400 49.2
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 9.8e-103 377.9 400 50.0
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 1.0e-99 367.9 452 47.3
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 1.7e-99 367.1 387 49.6
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 6.2e-97 358.6 294 58.5
COL.COLO4_18014 Corchorus olitorius HOM05D001734 ORTHO05D006943 2.2e-94 350.1 298 58.4
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 1.0e-91 341.3 405 44.2
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 5.4e-77 292.4 342 47.7
ATR0661G423 Amborella trichopoda HOM05D001734 ORTHO05D006943 7.1e-77 292.0 296 49.3
MD10G1129800 Malus domestica HOM05D001734 ORTHO05D006943 2.0e-71 273.9 396 39.9
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 8.7e-67 258.5 393 37.9
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis HOM05D001734 ORTHO05D006943 3.1e-64 250.0 398 36.4
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 2.2e-62 243.8 393 37.9
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 1.9e-61 240.7 405 36.0
Aa31LG7G15750 Aethionema arabicum HOM05D001734 ORTHO05D006943 2.0e-55 220.7 325 41.2
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 1.3e-46 191.4 264 41.7
CSS0028723 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D006943 4.2e-45 186.4 157 59.2
PSO421G0641 Papaver somniferum HOM05D001734 ORTHO05D006943 4.3e-42 176.4 158 56.3
PGSC0003DMG402018643 Solanum tuberosum HOM05D001734 ORTHO05D006943 9.1e-40 168.7 140 60.0
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 3.2e-37 160.2 145 51.0
SEGI_36815 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 5.7e-34 149.4 185 42.7
CSS0006982 Camellia sinensis var. sinensis HOM05D000560 ORTHO05D000417 2.4e-32 144.1 157 50.3
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 3.5e-31 140.2 103 60.2
CSS0005128 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 5.9e-31 139.4 103 67.0
AL7G48800 Arabidopsis lyrata HOM05D007723 ORTHO05D010327 1.6e-23 114.8 108 53.7
SEGI_35062 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 1.0e-22 112.1 121 41.3
CBR_g6357 Chara braunii HOM05D001734 ORTHO05D006943 1.1e-21 108.6 180 32.8
ATR0661G239 Amborella trichopoda HOM05D001734 ORTHO05D006943 1.5e-21 108.2 102 50.0
PGSC0003DMG401018643 Solanum tuberosum HOM05D001734 ORTHO05D006943 4.5e-15 86.7 76 53.9
SEGI_26648 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 9.5e-13 79.0 105 41.0
DCAR_022420 Daucus carota HOM05D001734 ORTHO05D006943 7.0e-08 62.8 57 57.9


User provided reference genes

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