Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 5.3e-170 600.9 297 100.0
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 1.5e-156 556.2 299 92.0
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 9.1e-154 547.0 299 90.6
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.8e-152 541.6 298 89.6
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 7.5e-148 527.3 297 85.9
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 4.5e-145 518.1 300 86.7
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 2.9e-144 515.4 298 84.6
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 5.5e-143 511.1 301 85.7
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 2.6e-140 502.3 300 84.0
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 7.0e-138 494.2 299 81.3
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 9.2e-138 493.8 298 80.5
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 2.0e-137 492.7 298 79.9
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.3e-136 490.0 298 79.5
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 3.8e-136 488.4 298 79.9
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 5.0e-136 488.0 299 80.3
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 5.0e-136 488.0 298 79.5
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 1.5e-135 486.5 299 79.3
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 5.6e-135 484.6 300 78.3
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.2e-134 483.4 309 78.0
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.2e-134 483.4 297 77.4
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.6e-134 483.0 298 78.2
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 2.1e-134 482.6 301 79.4
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 4.7e-134 481.5 300 78.3
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.0e-133 480.3 298 77.9
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 1.0e-133 480.3 298 78.5
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 4.0e-133 478.4 293 79.5
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 4.0e-133 478.4 298 77.5
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 4.0e-133 478.4 299 78.6
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 5.2e-133 478.0 298 77.9
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 8.9e-133 477.2 298 78.5
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.5e-132 476.5 298 78.9
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 2.0e-132 476.1 298 78.5
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.6e-132 475.7 292 78.4
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 5.8e-132 474.6 298 78.5
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.8e-132 474.6 299 77.9
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 7.5e-132 474.2 299 77.6
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 9.8e-132 473.8 298 78.9
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.3e-131 473.4 297 77.1
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.3e-131 473.4 299 77.9
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 3.7e-131 471.9 298 78.2
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.7e-131 471.9 300 77.7
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 6.4e-131 471.1 298 76.8
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 8.3e-131 470.7 298 77.9
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 2.4e-130 469.2 297 76.4
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 4.1e-130 468.4 299 76.9
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 1.6e-129 466.5 301 77.1
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 2.0e-129 466.1 298 75.5
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 4.6e-129 464.9 298 75.5
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 6.0e-129 464.5 298 76.2
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 6.0e-129 464.5 298 76.5
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 7.8e-129 464.2 298 76.2
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.0e-128 463.8 329 70.5
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.3e-128 463.4 298 76.2
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 2.3e-128 462.6 297 75.1
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 2.3e-128 462.6 331 71.0
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 3.0e-128 462.2 300 75.7
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.0e-128 462.2 297 75.1
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 6.6e-128 461.1 298 76.2
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 1.5e-127 459.9 301 76.4
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 7.3e-127 457.6 300 73.3
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 7.3e-127 457.6 302 75.8
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 1.2e-126 456.8 300 74.3
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.2e-126 456.8 298 75.2
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 2.8e-126 455.7 298 75.5
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.6e-126 455.3 297 73.1
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 8.0e-126 454.1 297 73.7
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 2.3e-125 452.6 298 74.2
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 3.1e-125 452.2 297 71.7
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 4.0e-125 451.8 270 85.6
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 5.2e-125 451.4 297 71.4
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 7.5e-124 447.6 282 76.6
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.9e-123 445.7 333 69.1
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 4.9e-123 444.9 293 75.1
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 6.4e-123 444.5 291 73.9
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 8.3e-123 444.1 281 77.9
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 1.1e-122 443.7 297 71.0
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 1.9e-122 443.0 297 72.7
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 3.2e-122 442.2 291 73.2
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 3.2e-122 442.2 291 73.2
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 3.2e-122 442.2 291 73.2
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 3.2e-122 442.2 291 73.2
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 5.4e-122 441.4 291 72.9
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.3e-117 426.0 311 69.1
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 6.8e-117 424.5 239 83.3
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 1.5e-116 423.3 248 81.9
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 8.3e-115 417.5 291 69.4
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 2.4e-114 416.0 238 86.6
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 3.5e-113 412.1 298 71.5
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 6.0e-113 411.4 268 76.9
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 6.0e-113 411.4 278 71.2
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.5e-111 406.0 290 68.3
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 2.1e-110 402.9 237 78.1
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 2.0e-108 396.4 293 68.3
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 1.4e-106 390.2 267 71.5
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.4e-106 389.4 241 77.2
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 3.9e-104 382.1 222 81.1
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 4.3e-103 378.6 247 74.5
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 1.9e-90 336.7 288 58.0
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 3.5e-89 332.4 293 55.6
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 1.3e-86 323.9 286 55.2
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 3.1e-85 319.3 410 47.6
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 1.3e-80 303.9 207 69.6
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 3.9e-80 302.4 281 62.3
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 4.2e-66 255.8 153 84.3
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.4e-64 250.8 271 50.2
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.4e-58 230.7 257 53.7
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 7.2e-58 228.4 117 89.7
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 3.7e-54 216.1 243 45.7
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 1.5e-52 210.7 286 38.1
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 8.5e-51 204.9 119 81.5
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 2.6e-47 193.4 224 52.2
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 7.4e-47 191.8 190 53.7
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 2.0e-39 167.2 175 52.6
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 5.3e-37 159.1 234 39.7
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 5.3e-37 159.1 111 71.2
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 1.3e-30 137.9 73 89.0
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 1.0e-24 118.2 82 74.4
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 7.8e-20 102.1 203 35.5
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.3e-19 100.5 52 90.4
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 2.5e-18 97.1 52 86.5
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 4.7e-17 92.8 60 75.0
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 8.0e-17 92.0 109 47.7
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 6.8e-16 89.0 54 75.9
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 2.0e-15 87.4 59 79.7
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 3.2e-13 80.1 55 72.7
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 4.1e-13 79.7 54 75.9
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 9.2e-13 78.6 59 62.7
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 6.6e-11 72.4 173 31.8
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 8.0e-09 65.5 183 29.5
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 2.3e-08 63.9 165 31.5
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.3e-08 63.9 60 61.7
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 5.2e-08 62.8 27 100.0
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 2.0e-07 60.8 168 31.5
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 4.4e-07 59.7 184 26.6
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 5.8e-07 59.3 93 40.9
PRCOL_00000730 Prasinoderma coloniale HOM05D016613 ORTHO05D014817 1.7e-06 57.8 170 28.8
Psat6g121040 Pisum sativum HOM05D005598 ORTHO05D324080 2.9e-06 57.0 291 26.5
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 3.7e-06 56.6 42 66.7
A09p55890 Brassica napus HOM05D005598 ORTHO05D040595 4.9e-06 56.2 76 36.8
BraA09t40992Z Brassica rapa HOM05D005598 ORTHO05D040595 8.3e-06 55.5 60 43.3
Lsat_1_v5_gn_3_11781 Lactuca sativa HOM05D000104 ORTHO05D008354 8.3e-06 55.5 57 49.1


User provided reference genes

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