Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23232 Trifolium pratense HOM05D005173 ORTHO05D006214 5.6e-77 290.8 142 100.0
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 2.5e-69 265.4 142 90.1
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 3.1e-67 258.5 142 87.3
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 2.1e-63 245.7 142 83.1
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 2.7e-63 245.4 142 83.1
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 4.6e-63 244.6 142 82.4
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 8.7e-62 240.4 136 83.8
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 8.7e-62 240.4 142 82.4
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 3.3e-61 238.4 136 82.4
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 3.3e-61 238.4 133 83.5
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 4.3e-61 238.0 136 79.4
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 9.7e-61 236.9 142 78.2
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 1.6e-60 236.1 142 76.8
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 2.1e-60 235.7 142 80.3
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 8.2e-60 233.8 136 84.6
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 8.2e-60 233.8 136 84.6
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 8.2e-60 233.8 133 82.7
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 1.1e-59 233.4 131 81.7
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 2.4e-59 232.3 137 75.9
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 2.4e-59 232.3 133 82.0
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 2.4e-59 232.3 133 81.2
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 2.4e-59 232.3 133 81.2
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 2.4e-59 232.3 133 81.2
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 3.1e-59 231.9 126 87.3
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 4.1e-59 231.5 142 79.6
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 5.3e-59 231.1 133 81.2
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 5.3e-59 231.1 141 76.6
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 9.0e-59 230.3 137 80.3
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 9.0e-59 230.3 142 74.6
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 2.0e-58 229.2 132 81.1
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 3.4e-58 228.4 131 80.9
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 5.9e-58 227.6 133 78.2
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 7.6e-58 227.3 142 76.1
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 1.0e-57 226.9 137 78.8
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 1.0e-57 226.9 128 82.8
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 1.3e-57 226.5 134 77.6
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 1.7e-57 226.1 141 75.9
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.9e-57 225.3 135 76.3
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 2.9e-57 225.3 137 75.2
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 3.8e-57 224.9 136 76.5
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 5.0e-57 224.6 137 75.9
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 5.0e-57 224.6 134 76.1
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 5.0e-57 224.6 134 76.1
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 5.0e-57 224.6 132 79.5
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 6.5e-57 224.2 132 79.5
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 6.5e-57 224.2 136 78.7
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 8.5e-57 223.8 142 72.5
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 1.1e-56 223.4 130 79.2
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 1.1e-56 223.4 139 75.5
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 1.1e-56 223.4 138 73.2
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.4e-56 223.0 134 75.4
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.4e-56 223.0 134 75.4
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.4e-56 223.0 134 76.1
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 1.4e-56 223.0 132 78.0
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 1.9e-56 222.6 132 78.8
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.9e-56 222.6 137 74.5
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 1.9e-56 222.6 140 72.9
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 1.9e-56 222.6 135 77.8
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 2.5e-56 222.2 130 78.5
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 2.5e-56 222.2 136 76.5
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 2.5e-56 222.2 130 78.5
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 2.5e-56 222.2 132 76.5
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 3.2e-56 221.9 130 78.5
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 3.2e-56 221.9 130 78.5
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 3.2e-56 221.9 136 75.7
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 4.2e-56 221.5 135 77.8
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 4.2e-56 221.5 138 75.4
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 5.5e-56 221.1 136 74.3
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 5.5e-56 221.1 142 72.5
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 7.2e-56 220.7 139 73.4
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 7.2e-56 220.7 136 75.7
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 7.2e-56 220.7 138 75.4
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 7.2e-56 220.7 142 73.9
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 9.3e-56 220.3 138 74.6
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 1.2e-55 219.9 131 80.9
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 1.2e-55 219.9 131 80.9
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 1.6e-55 219.5 138 73.9
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 2.7e-55 218.8 139 71.9
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 2.7e-55 218.8 133 75.9
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 4.6e-55 218.0 136 75.0
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 4.6e-55 218.0 136 77.9
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 6.1e-55 217.6 133 77.4
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 6.1e-55 217.6 135 74.1
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 6.1e-55 217.6 142 71.8
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 7.9e-55 217.2 140 72.9
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 1.0e-54 216.9 128 76.6
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 1.0e-54 216.9 126 80.2
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 1.0e-54 216.9 142 74.6
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 1.0e-54 216.9 142 71.8
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 1.3e-54 216.5 132 75.8
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 1.8e-54 216.1 142 71.8
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 1.8e-54 216.1 128 75.8
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 3.0e-54 215.3 132 75.8
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 3.0e-54 215.3 128 77.3
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 3.0e-54 215.3 131 75.6
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 8.7e-54 213.8 138 70.3
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 1.5e-53 213.0 128 75.8
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 1.9e-53 212.6 135 74.1
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 1.9e-53 212.6 133 72.9
HPP92_009231 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.5e-53 212.2 134 70.1
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 3.3e-53 211.8 139 74.1
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 4.3e-53 211.5 128 77.3
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 5.7e-53 211.1 142 71.1
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 9.7e-53 210.3 128 75.8
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 9.7e-53 210.3 138 73.2
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 3.7e-52 208.4 138 72.5
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 4.8e-52 208.0 135 72.6
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 4.8e-52 208.0 138 72.5
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 6.3e-52 207.6 137 71.5
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 8.2e-52 207.2 138 69.6
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 1.8e-51 206.1 132 72.7
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 1.8e-51 206.1 167 63.5
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 4.1e-51 204.9 137 72.3
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 5.3e-51 204.5 131 74.0
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 9.1e-51 203.8 124 74.2
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 1.2e-50 203.4 132 69.7
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 2.6e-50 202.2 132 71.2
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.6e-50 202.2 137 67.9
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 1.3e-49 199.9 132 68.2
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 1.1e-45 186.8 119 71.4
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 8.2e-44 180.6 141 61.7
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 8.5e-41 170.6 122 63.1
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 3.2e-40 168.7 108 72.2
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 1.2e-39 166.8 96 77.1
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 1.7e-33 146.4 105 64.8
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 1.1e-32 143.7 128 55.5
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 2.5e-32 142.5 127 55.9
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 3.0e-30 135.6 123 54.5
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.1e-16 90.5 63 71.4
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 7.2e-16 87.8 58 72.4
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 1.3e-12 77.0 125 32.8
Nn2g12540 Nelumbo nucifera HOM05D005173 ORTHO05D006214 2.7e-10 69.3 45 62.2
PRCOL_00002900 Prasinoderma coloniale HOM05D005173 ORTHO05D006214 5.6e-08 61.6 122 30.3
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 9.5e-08 60.8 123 34.1


User provided reference genes

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