Gene: Carub.0006s1885

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1885
  • Transcript Identifier Carub.0006s1885.1
  • Gene Type Coding gene
  • Location scaffold_6 : 6960901-6963616 : negative

Gene Family Information

  • ID HOM05D005173
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1885.v1.1
  • pacid 39248362
  • synonym Carubv10001528m.g

Descriptions

  • Description KOG4391 - Predicted alpha/beta hydrolase BEM46
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G20520
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT5G20520
GO:0009638
ISO
PLAZA Integrative Orthologyphototropism AT5G20520
GO:0009415
ISO
PLAZA Integrative Orthologyresponse to water AT5G20520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008236
IEA
InterProserine-type peptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20520
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G20520
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G20520
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G20520
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G20520
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G20520
GO:0019866
ISO
PLAZA Integrative Orthologyorganelle inner membrane AT5G20520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain
IPR029058 Alpha/Beta hydrolase fold
Mapman id Description
35.1 not assigned.annotated