Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.7e-261 904.8 471 100.0
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 2.5e-206 722.2 474 80.6
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 6.8e-204 714.1 483 79.7
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.9e-201 706.1 436 84.9
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 8.1e-181 637.5 476 72.3
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 3.1e-180 635.6 474 71.9
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 5.5e-177 624.8 477 71.1
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 2.8e-173 612.5 474 70.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.4e-172 610.1 478 68.2
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 5.8e-171 604.7 480 69.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-162 577.0 486 66.5
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 2.9e-162 575.9 480 66.5
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.0e-127 461.1 475 52.6
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 3.8e-122 442.6 471 53.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.5e-121 438.7 475 50.1
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 9.5e-121 438.0 480 50.2
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.8e-119 433.7 480 51.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 2.3e-119 433.3 470 51.5
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 7.5e-118 428.3 470 51.3
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.4e-116 424.1 479 49.9
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 4.1e-116 422.5 325 67.4
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 5.0e-114 415.6 477 50.3
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.0e-114 415.6 485 49.9
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 5.6e-113 412.1 469 49.0
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.2e-111 405.6 487 49.5
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 2.9e-109 399.8 466 48.5
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 6.4e-109 398.7 479 48.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.9e-108 397.1 464 48.3
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.4e-108 396.7 478 49.4
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.0e-106 391.3 467 46.9
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 2.3e-106 390.2 463 47.1
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 6.6e-106 388.7 472 48.1
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.5e-105 386.7 474 45.6
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 7.3e-105 385.2 476 46.8
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 3.6e-104 382.9 413 50.8
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.4e-102 376.3 478 48.3
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 7.5e-102 375.2 443 46.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.7e-101 374.0 452 45.8
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.7e-101 372.9 465 47.7
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.4e-100 369.0 471 45.4
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 7.0e-100 368.6 473 45.5
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.0e-98 364.8 472 44.1
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.3e-98 363.6 473 45.0
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.0e-98 363.2 451 46.1
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.3e-97 359.8 473 45.7
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.3e-97 359.4 477 44.9
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.2e-96 357.8 470 43.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 4.7e-96 355.9 468 43.8
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.2e-96 355.5 472 44.9
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 8.9e-95 351.7 467 43.5
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.2e-94 351.3 469 45.6
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 3.4e-94 349.7 466 44.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 9.9e-94 348.2 446 44.8
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.7e-93 347.4 477 45.3
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 4.1e-92 342.8 448 44.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 7.1e-92 342.0 472 44.1
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.6e-91 340.9 488 43.9
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.6e-91 340.9 412 46.1
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.7e-91 340.1 480 43.5
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.3e-90 337.8 471 43.1
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 6.6e-90 335.5 462 40.9
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.9e-89 334.0 465 42.8
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 7.3e-89 332.0 469 41.4
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 9.5e-89 331.6 449 43.9
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.6e-88 330.9 471 41.8
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 5.2e-87 325.9 336 50.3
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 4.4e-86 322.8 468 43.2
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.7e-85 320.9 437 43.5
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 6.4e-85 318.9 467 40.9
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.0e-82 311.6 426 41.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.7e-82 310.8 471 41.4
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.0e-82 310.1 469 40.1
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 7.3e-81 305.4 460 40.2
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 9.6e-81 305.1 471 41.2
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 8.1e-80 302.0 464 39.2
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 8.1e-80 302.0 467 40.5
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.8e-79 300.8 471 39.9
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.1e-79 300.1 467 40.5
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 4.0e-79 299.7 467 40.3
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.2e-78 298.1 467 40.0
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.2e-78 298.1 467 40.3
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.6e-78 297.0 471 39.9
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 4.4e-78 296.2 468 39.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 4.4e-78 296.2 461 42.7
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.4e-76 290.4 357 49.0
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 5.4e-76 289.3 471 39.3
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 9.3e-76 288.5 471 38.9
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.6e-75 287.7 316 59.8
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.0e-74 285.0 483 38.9
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 6.6e-74 282.3 356 44.1
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.1e-73 281.6 461 37.1
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.9e-73 280.8 450 41.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.5e-73 280.4 465 39.4
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 8.1e-72 275.4 312 49.0
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.9e-68 264.2 451 37.7
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.1e-65 255.0 305 48.5
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 3.9e-58 229.9 467 34.7
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.7e-56 223.4 322 40.7
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-55 219.9 156 71.2
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.6e-51 208.0 468 36.1
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.0e-42 177.2 164 59.1
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-41 174.1 164 58.5
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-41 174.1 164 58.5
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 3.7e-40 170.2 151 64.9
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 8.5e-37 159.1 369 33.3
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.9e-36 157.9 185 46.5
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.4e-33 146.7 118 64.4
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.2e-29 134.4 121 61.2
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 3.2e-28 130.6 233 38.6
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.5e-25 121.7 252 32.5
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 3.2e-20 104.0 78 66.7
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.2e-16 91.3 496 26.6
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 8.3e-16 89.4 165 34.5
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 8.3e-16 89.4 165 34.5
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 7.7e-14 82.8 122 39.3
TPR.G16274 Trifolium pratense HOM05D006143 ORTHO05D007587 1.5e-12 78.6 42 90.5
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.6e-11 75.1 92 42.4
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 3.6e-11 73.9 70 52.9
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-10 71.6 89 49.4
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.8e-08 64.3 111 33.3
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 1.2e-06 58.9 454 20.9
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 4.5e-06 57.0 55 45.5
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 5.9e-06 56.6 114 31.6


User provided reference genes

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