Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13585 Trifolium pratense HOM05D004035 ORTHO05D004631 1.6e-71 272.7 143 100.0
TPR.G22289 Trifolium pratense HOM05D004035 ORTHO05D004631 6.3e-44 181.0 235 51.1
Ca_24847_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 2.3e-41 172.6 233 49.4
Medtr5g020140 Medicago truncatula HOM05D004035 ORTHO05D004631 1.5e-40 169.9 100 90.0
Glyma.01G176000 Glycine max HOM05D004035 ORTHO05D004631 3.3e-40 168.7 234 48.3
VMungo1215G2866 Vigna mungo HOM05D004035 ORTHO05D004631 3.3e-40 168.7 234 48.3
Phvul.002G030300 Phaseolus vulgaris HOM05D004035 ORTHO05D004631 5.5e-40 167.9 234 47.9
Glyma.11G068300 Glycine max HOM05D004035 ORTHO05D004631 9.5e-40 167.2 233 46.8
Psat2g159680 Pisum sativum HOM05D004035 ORTHO05D004631 2.1e-39 166.0 233 48.9
Lj2g0023524 Lotus japonicus HOM05D004035 ORTHO05D004631 8.0e-39 164.1 234 47.0
LjContig00448g0016984 Lotus japonicus HOM05D004035 ORTHO05D004631 4.0e-38 161.8 233 45.1
Lj1g0016074 Lotus japonicus HOM05D004035 ORTHO05D004631 8.9e-38 160.6 236 44.5
Lalb_Chr09g0322391 Lupinus albus HOM05D004035 ORTHO05D004631 3.4e-37 158.7 242 45.9
Atru.chr3.574 Acer truncatum HOM05D004035 ORTHO05D004631 7.5e-37 157.5 237 46.0
arahy.Tifrunner.gnm1.ann1.6E6Z42 Arachis hypogaea HOM05D004035 ORTHO05D004631 1.3e-36 156.8 234 45.3
arahy.Tifrunner.gnm1.ann1.GM6JEQ Arachis hypogaea HOM05D004035 ORTHO05D004631 1.3e-36 156.8 234 45.3
MD15G1261900 Malus domestica HOM05D004035 ORTHO05D004631 2.8e-36 155.6 237 45.6
Lalb_Chr16g0388281 Lupinus albus HOM05D004035 ORTHO05D004631 3.7e-36 155.2 233 45.5
Potri.005G123000 Populus trichocarpa HOM05D004035 ORTHO05D004631 6.3e-36 154.5 236 45.3
Haze_15090 Corylus avellana HOM05D004035 ORTHO05D004631 8.3e-36 154.1 236 45.8
Cfa004306 Carpinus fangiana HOM05D004035 ORTHO05D004631 1.1e-35 153.7 236 45.8
QL06p046086 Quercus lobata HOM05D004035 ORTHO05D004631 1.1e-35 153.7 236 45.3
Lj2C453G20 Lonicera japonica HOM05D004035 ORTHO05D004631 1.4e-35 153.3 238 44.5
CANSAT01G0227 Cannabis sativa HOM05D004035 ORTHO05D004631 1.8e-35 152.9 235 45.5
Manes.02G093700 Manihot esculenta HOM05D004035 ORTHO05D004631 1.8e-35 152.9 236 44.9
Cpa.g.sc1294.1 Carica papaya HOM05D004035 ORTHO05D004631 3.1e-35 152.1 206 48.5
PGR102G3072 Punica granatum HOM05D004035 ORTHO05D004631 3.1e-35 152.1 236 45.3
Prupe.7G154500 Prunus persica HOM05D004035 ORTHO05D004631 4.1e-35 151.8 236 44.9
CiPaw.01G038000 Carya illinoinensis HOM05D004035 ORTHO05D004631 5.4e-35 151.4 236 44.5
MD02G1147600 Malus domestica HOM05D004035 ORTHO05D004631 1.6e-34 149.8 236 45.3
PGSC0003DMG400003507 Solanum tuberosum HOM05D004035 ORTHO05D004631 1.6e-34 149.8 236 44.1
Actinidia36560 Actinidia chinensis HOM05D004035 ORTHO05D004631 2.7e-34 149.1 236 44.9
CAN.G1003.4 Capsicum annuum HOM05D004035 ORTHO05D004631 2.7e-34 149.1 236 44.5
Peaxi162Scf00366g00121 Petunia axillaris HOM05D004035 ORTHO05D004631 2.7e-34 149.1 235 44.3
CSS0025574 Camellia sinensis var. sinensis HOM05D004035 ORTHO05D004631 3.5e-34 148.7 236 44.1
Solyc07g056660.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 3.5e-34 148.7 236 44.5
Eucgr.H01269 Eucalyptus grandis HOM05D004035 ORTHO05D004631 4.5e-34 148.3 236 44.5
Sed0003321 Sechium edule HOM05D004035 ORTHO05D004631 4.5e-34 148.3 237 43.9
TPR.G34978 Trifolium pratense HOM05D004035 ORTHO05D004631 4.5e-34 148.3 233 43.3
COL.COLO4_22081 Corchorus olitorius HOM05D004035 ORTHO05D004631 5.9e-34 147.9 234 43.6
Ciclev10024797m.g Citrus clementina HOM05D004035 ORTHO05D004631 7.8e-34 147.5 237 43.9
Duzib147G1708 Durio zibethinus HOM05D004035 ORTHO05D004631 7.8e-34 147.5 234 44.0
Psat4g092560 Pisum sativum HOM05D004035 ORTHO05D004631 7.8e-34 147.5 233 43.3
Solyc02g085220.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 1.0e-33 147.1 236 43.6
TWI73G0243 Tripterygium wilfordii HOM05D004035 ORTHO05D004631 1.3e-33 146.7 236 44.1
Potri.007G025700 Populus trichocarpa HOM05D004035 ORTHO05D004631 1.7e-33 146.4 236 43.6
Sopen02g029920 Solanum pennellii HOM05D004035 ORTHO05D004631 2.3e-33 146.0 236 43.2
Actinidia12124 Actinidia chinensis HOM05D004035 ORTHO05D004631 2.9e-33 145.6 236 44.1
Sopen07g030000 Solanum pennellii HOM05D004035 ORTHO05D004631 2.9e-33 145.6 236 44.1
Thecc.01G133800 Theobroma cacao HOM05D004035 ORTHO05D004631 2.9e-33 145.6 234 43.6
Ca_22265_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 3.8e-33 145.2 233 42.5
Ca_22279_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 3.8e-33 145.2 233 42.5
Dinv39986 Davidia involucrata HOM05D004035 ORTHO05D004631 3.8e-33 145.2 236 43.2
Nn1g04984 Nelumbo nucifera HOM05D004035 ORTHO05D004631 3.8e-33 145.2 231 43.7
Nitab4.5_0000178g0040 Nicotiana tabacum HOM05D004035 ORTHO05D004631 3.8e-33 145.2 236 43.6
Nitab4.5_0001385g0050 Nicotiana tabacum HOM05D004035 ORTHO05D004631 3.8e-33 145.2 236 43.6
Gohir.D11G190900 Gossypium hirsutum HOM05D004035 ORTHO05D004631 6.6e-33 144.4 236 44.5
Gorai.007G203400 Gossypium raimondii HOM05D004035 ORTHO05D004631 6.6e-33 144.4 236 44.5
Cc03_g03620 Coffea canephora HOM05D004035 ORTHO05D004631 1.1e-32 143.7 235 43.0
AUR62004050 Chenopodium quinoa HOM05D004035 ORTHO05D004631 1.5e-32 143.3 235 43.0
Ah.02g125200 Amaranthus hybridus HOM05D004035 ORTHO05D004631 1.9e-32 142.9 232 43.1
Medtr8g077680 Medicago truncatula HOM05D004035 ORTHO05D004631 1.9e-32 142.9 233 42.5
Sabra07G0022700 Salix brachista HOM05D004035 ORTHO05D004631 1.9e-32 142.9 236 43.2
CsaV3_UNG172360 Cucumis sativus L. HOM05D004035 ORTHO05D004631 2.5e-32 142.5 237 42.6
FvH4_1g13311 Fragaria vesca HOM05D004035 ORTHO05D004631 2.5e-32 142.5 240 42.5
FAN19G0080 Fragaria x ananassa HOM05D004035 ORTHO05D004631 2.5e-32 142.5 240 42.5
Gohir.A11G184400 Gossypium hirsutum HOM05D004035 ORTHO05D004631 2.5e-32 142.5 236 43.6
GSVIVG01018960001 Vitis vinifera HOM05D004035 ORTHO05D004631 2.5e-32 142.5 236 43.2
EL10Ac6g15563 Beta vulgaris HOM05D004035 ORTHO05D004631 3.3e-32 142.1 233 42.9
AUR62007565 Chenopodium quinoa HOM05D004035 ORTHO05D004631 3.3e-32 142.1 235 42.6
Migut.H00988 Erythranthe guttata HOM05D004035 ORTHO05D004631 4.3e-32 141.7 234 42.3
ClCG07G009230 Citrullus lanatus HOM05D004035 ORTHO05D004631 5.6e-32 141.4 237 42.2
MELO3C017565.2 Cucumis melo HOM05D004035 ORTHO05D004631 5.6e-32 141.4 237 42.2
Hma1.2p1_0400F.1_g144430 Hydrangea macrophylla HOM05D004035 ORTHO05D004631 5.6e-32 141.4 236 43.6
SalBow8G0583 Salvia bowleyana HOM05D004035 ORTHO05D004631 7.3e-32 141.0 234 42.7
arahy.Tifrunner.gnm1.ann1.ZDS5RA Arachis hypogaea HOM05D004035 ORTHO05D004631 1.2e-31 140.2 234 41.9
PGSC0003DMG400027646 Solanum tuberosum HOM05D004035 ORTHO05D004631 1.2e-31 140.2 99 76.8
FAN26G1872 Fragaria x ananassa HOM05D004035 ORTHO05D004631 1.6e-31 139.8 240 42.1
FAN28G2497 Fragaria x ananassa HOM05D004035 ORTHO05D004631 2.1e-31 139.4 240 42.1
Thecc.01G035900 Theobroma cacao HOM05D004035 ORTHO05D004631 2.1e-31 139.4 234 42.7
DCAR_017291 Daucus carota HOM05D004035 ORTHO05D004631 2.8e-31 139.0 236 42.4
Rhsim02G0182400 Rhododendron simsii HOM05D004035 ORTHO05D004631 2.8e-31 139.0 234 42.3
RcHm_v2.0_Chr2g0101581 Rosa chinensis HOM05D004035 ORTHO05D004631 3.6e-31 138.7 242 41.3
vmacro11086 Vaccinium macrocarpon HOM05D004035 ORTHO05D004631 3.6e-31 138.7 105 71.4
SGA_v2.0_scaffold276G46626 Striga asiatica HOM05D004035 ORTHO05D004631 1.0e-30 137.1 99 74.7
arahy.Tifrunner.gnm1.ann1.JC6DGE Arachis hypogaea HOM05D004035 ORTHO05D004631 4.0e-30 135.2 233 41.2
DCAR_025943 Daucus carota HOM05D004035 ORTHO05D004631 6.8e-30 134.4 238 39.5
Gorai.003G015100 Gossypium raimondii HOM05D004035 ORTHO05D004631 6.8e-30 134.4 89 77.5
HPP92_004247 Vanilla planifolia HOM05D004035 ORTHO05D004631 6.8e-30 134.4 191 44.5
RcHm_v2.0_Chr2g0101111 Rosa chinensis HOM05D004035 ORTHO05D004631 8.9e-30 134.0 240 40.8
TAR376G0366 Trochodendron aralioides HOM05D004035 ORTHO05D004631 1.5e-29 133.3 233 40.8
C07p61810 Brassica napus HOM05D004035 ORTHO05D004631 2.6e-29 132.5 238 40.3
BolC7t46602H Brassica oleracea HOM05D004035 ORTHO05D004631 2.6e-29 132.5 238 40.3
Gohir.D03G014800 Gossypium hirsutum HOM05D004035 ORTHO05D004631 4.4e-29 131.7 107 65.4
A03p64370 Brassica napus HOM05D004035 ORTHO05D004631 5.8e-29 131.3 238 40.3
BraA03t15502Z Brassica rapa HOM05D004035 ORTHO05D004631 5.8e-29 131.3 238 40.3
CAN.G358.86 Capsicum annuum HOM05D004035 ORTHO05D004631 5.8e-29 131.3 103 72.8
AL7G14420 Arabidopsis lyrata HOM05D004035 ORTHO05D004631 7.5e-29 131.0 237 40.1
Carub.0007s0370 Capsella rubella HOM05D004035 ORTHO05D004631 1.7e-28 129.8 237 39.7
AT4G36630 Arabidopsis thaliana HOM05D004035 ORTHO05D004631 2.2e-28 129.4 237 39.7
CARHR244970 Cardamine hirsuta HOM05D004035 ORTHO05D004631 2.2e-28 129.4 238 39.5
Thhalv10024305m.g Eutrema salsugineum HOM05D004035 ORTHO05D004631 2.2e-28 129.4 237 39.7
Aqoxy6G01113 Aquilegia oxysepala HOM05D004035 ORTHO05D004631 6.4e-28 127.9 99 70.7
ECA246G3379 Erigeron canadensis HOM05D004035 ORTHO05D004631 6.4e-28 127.9 232 39.2
Sp7g34290 Schrenkiella parvula HOM05D004035 ORTHO05D004631 8.3e-28 127.5 237 39.2
Aa31LG6G13430 Aethionema arabicum HOM05D004035 ORTHO05D004631 2.4e-27 125.9 235 38.3
MBI07_g11484_MAGBIO Magnolia biondii HOM05D004035 ORTHO05D004631 5.4e-27 124.8 98 69.4
PSO541G3635 Papaver somniferum HOM05D004035 ORTHO05D004631 7.0e-27 124.4 98 68.4
PSO675G4195 Papaver somniferum HOM05D004035 ORTHO05D004631 7.0e-27 124.4 98 68.4
TAR362G0832 Trochodendron aralioides HOM05D004035 ORTHO05D004631 1.2e-26 123.6 100 67.0
unitig_52.g17587 Utricularia gibba HOM05D004035 ORTHO05D004631 1.2e-26 123.6 231 38.5
HanXRQChr16g0530441 Helianthus annuus HOM05D004035 ORTHO05D004631 2.0e-26 122.9 88 72.7
ECA232G2840 Erigeron canadensis HOM05D004035 ORTHO05D004631 2.7e-26 122.5 238 37.0
Lsat_1_v5_gn_3_76401 Lactuca sativa HOM05D004035 ORTHO05D004631 3.5e-26 122.1 98 66.3
Nn7g37554 Nelumbo nucifera HOM05D004035 ORTHO05D004631 3.0e-25 119.0 232 36.2
Oeu042264.1 Olea europaea HOM05D004035 ORTHO05D004631 6.6e-25 117.9 252 37.7
PSO837G0008 Papaver somniferum HOM05D004035 ORTHO05D004631 2.5e-24 115.9 98 62.2
Lsat_1_v5_gn_4_152080 Lactuca sativa HOM05D004035 ORTHO05D004631 4.3e-24 115.2 235 35.7
PSO017G4184 Papaver somniferum HOM05D004035 ORTHO05D004631 9.5e-24 114.0 98 60.2
BcaC01g00456 Brassica carinata HOM05D004035 ORTHO05D004631 4.7e-23 111.7 237 36.3
ATR0743G236 Amborella trichopoda HOM05D004035 ORTHO05D004631 1.1e-22 110.5 234 36.8
Zm00001eb055180 Zea mays HOM05D004035 ORTHO05D004631 1.4e-22 110.2 228 37.3
Os03g0715500 Oryza sativa ssp. japonica HOM05D004035 ORTHO05D004631 6.8e-22 107.8 229 36.7
HanXRQChr09g0261471 Helianthus annuus HOM05D004035 ORTHO05D004631 3.4e-21 105.5 231 34.2
SEGI_13313 Sequoiadendron giganteum HOM05D004035 ORTHO05D004631 3.4e-21 105.5 122 52.5
CDE09G0689 Ceratophyllum demersum HOM05D004035 ORTHO05D004631 2.2e-20 102.8 233 34.3
Mapoly0160s0027 Marchantia polymorpha HOM05D004035 ORTHO05D004631 2.9e-20 102.4 108 54.6
CsaV3_4G004980 Cucumis sativus L. HOM05D004035 ORTHO05D004631 6.0e-18 94.7 101 56.4
AagrBONN_evm.TU.Sc2ySwM_340.480 Anthoceros agrestis HOM05D004035 ORTHO05D004631 1.7e-17 93.2 110 49.1
Pp3c10_5300 Physcomitrium patens HOM05D004035 ORTHO05D004631 1.1e-14 84.0 85 54.1
CBR_g34968 Chara braunii HOM05D004035 ORTHO05D004631 7.1e-11 71.2 85 45.9
SMO145G0075 Selaginella moellendorffii HOM05D004035 ORTHO05D004631 2.1e-10 69.7 111 39.6
Sc03g0002970 Simmondsia chinensis HOM05D004035 ORTHO05D004631 1.1e-08 63.9 185 31.4
Cre06.g278124 Chlamydomonas reinhardtii HOM05D004035 ORTHO05D004631 1.4e-06 57.0 94 39.4


User provided reference genes

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