Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13225 Trifolium pratense HOM05D001734 ORTHO05D006943 7.1e-116 420.6 214 100.0
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 1.1e-108 396.7 214 93.9
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 9.3e-108 393.7 214 92.5
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 7.9e-107 390.6 214 92.5
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 1.8e-106 389.4 214 91.6
Phvul.007G017000 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 5.6e-105 384.4 214 89.7
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 6.9e-103 377.5 214 88.3
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 9.0e-103 377.1 214 87.9
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 2.0e-102 375.9 214 88.3
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 4.2e-100 368.2 214 87.9
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 1.3e-98 363.2 214 83.6
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 2.3e-98 362.5 214 83.6
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 2.5e-97 359.0 214 82.7
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 1.4e-95 353.2 214 81.8
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 3.1e-95 352.1 214 82.2
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 4.1e-95 351.7 214 82.2
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 4.5e-94 348.2 212 82.1
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 1.7e-93 346.3 214 78.0
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 2.9e-93 345.5 214 81.3
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 1.9e-92 342.8 214 80.4
QL11p052526 Quercus lobata HOM05D001734 ORTHO05D006943 5.5e-92 341.3 214 79.9
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 9.3e-92 340.5 214 79.9
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 9.3e-92 340.5 214 79.9
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 1.6e-91 339.7 214 78.0
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 3.5e-91 338.6 214 79.4
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 7.9e-91 337.4 214 78.0
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 1.1e-89 333.6 214 74.8
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 1.5e-89 333.2 214 79.4
Cpa.g.sc20.125 Carica papaya HOM05D001734 ORTHO05D006943 1.9e-89 332.8 214 77.6
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 1.9e-89 332.8 214 78.0
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 1.9e-89 332.8 214 77.6
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 2.5e-89 332.4 214 77.6
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 3.3e-89 332.0 214 77.6
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 4.3e-89 331.6 214 77.6
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 7.4e-89 330.9 214 75.2
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 7.4e-89 330.9 214 77.6
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 1.3e-88 330.1 214 77.6
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 2.2e-88 329.3 214 76.2
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 2.8e-88 328.9 214 75.2
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 2.8e-88 328.9 214 76.2
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 4.8e-88 328.2 214 77.1
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 6.3e-88 327.8 214 76.2
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 8.2e-88 327.4 214 76.2
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 8.2e-88 327.4 214 77.6
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 1.4e-87 326.6 214 74.8
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 1.4e-87 326.6 214 75.2
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 1.8e-87 326.2 214 77.1
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 1.8e-87 326.2 214 74.8
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 3.1e-87 325.5 214 77.1
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 6.9e-87 324.3 214 76.6
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 6.9e-87 324.3 214 76.6
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 6.9e-87 324.3 214 75.2
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 6.9e-87 324.3 214 73.8
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 1.2e-86 323.6 214 74.3
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.2e-86 323.6 214 74.8
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 1.2e-86 323.6 212 75.9
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 1.5e-86 323.2 214 76.2
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 2.0e-86 322.8 214 74.8
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.6e-86 322.4 214 74.3
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 4.5e-86 321.6 213 73.7
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 4.5e-86 321.6 214 73.8
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 7.7e-86 320.9 214 74.3
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 1.0e-85 320.5 214 76.6
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 1.7e-85 319.7 214 74.8
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 1.7e-85 319.7 214 75.2
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 2.2e-85 319.3 214 73.8
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 2.9e-85 318.9 214 75.2
Thecc.02G053500 Theobroma cacao HOM05D001734 ORTHO05D006943 5.0e-85 318.2 214 74.3
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 3.2e-84 315.5 214 72.4
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 9.4e-84 313.9 214 73.4
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 9.4e-84 313.9 214 73.4
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 9.4e-84 313.9 214 71.5
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 1.6e-83 313.2 214 72.0
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 2.1e-83 312.8 214 74.8
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 2.1e-83 312.8 214 73.4
Carub.0008s0072 Capsella rubella HOM05D001734 ORTHO05D006943 2.7e-83 312.4 214 72.4
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 3.6e-83 312.0 214 71.0
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 4.6e-83 311.6 214 72.9
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 4.6e-83 311.6 214 72.9
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 1.4e-82 310.1 214 71.0
CDE09G0008 Ceratophyllum demersum HOM05D001734 ORTHO05D006943 4.3e-81 305.1 213 70.0
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 7.4e-81 304.3 217 71.0
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 9.7e-81 303.9 211 72.5
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 1.4e-79 300.1 214 68.7
SGA_v2.0_scaffold6G03244 Striga asiatica HOM05D001734 ORTHO05D006943 1.4e-79 300.1 214 68.7
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 3.1e-79 298.9 215 69.3
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 5.3e-79 298.1 214 69.2
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 1.9e-76 289.7 214 66.8
ATR0661G423 Amborella trichopoda HOM05D001734 ORTHO05D006943 1.6e-75 286.6 213 68.1
MD10G1129700 Malus domestica HOM05D001734 ORTHO05D006943 2.1e-75 286.2 214 69.2
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 3.6e-75 285.4 214 67.3
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 1.1e-73 280.4 214 64.0
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.1e-71 273.9 197 70.6
Aa31LG7G15750 Aethionema arabicum HOM05D001734 ORTHO05D006943 1.3e-69 266.9 188 69.7
SEGI_35062 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 8.8e-66 254.2 213 59.6
SMO203G0188 Selaginella moellendorffii HOM05D001734 ORTHO05D006943 2.2e-48 196.4 211 47.4
Mapoly0026s0077 Marchantia polymorpha HOM05D001734 ORTHO05D006943 3.7e-48 195.7 213 45.5
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 6.3e-48 194.9 210 47.6
COL.COLO4_36420 Corchorus olitorius HOM05D001734 ORTHO05D006943 1.7e-37 160.2 119 68.9
CBR_g6357 Chara braunii HOM05D001734 ORTHO05D006943 4.3e-36 155.6 182 42.3
QL11p050057 Quercus lobata HOM05D001734 ORTHO05D006943 1.8e-26 123.6 80 73.8
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis HOM05D001734 ORTHO05D006943 3.4e-25 119.4 131 45.0
Cre10.g467200 Chlamydomonas reinhardtii HOM05D001734 ORTHO05D006943 8.6e-13 78.2 229 25.8


User provided reference genes

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