Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 3.9e-142 508.1 248 100.0
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 3.3e-117 425.2 242 86.0
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 6.7e-110 401.0 242 81.8
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 3.3e-109 398.7 245 81.2
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 2.4e-107 392.5 243 79.8
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 9.1e-107 390.6 241 78.4
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 1.2e-103 380.2 241 78.4
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 4.7e-103 378.3 241 75.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 2.0e-101 372.9 243 77.4
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.3e-89 333.6 244 71.3
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 5.0e-89 331.6 241 71.4
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 1.1e-88 330.5 241 71.4
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 9.5e-88 327.4 242 68.2
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.2e-87 327.0 246 69.1
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 2.1e-87 326.2 240 68.8
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 2.1e-87 326.2 245 68.2
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 2.3e-86 322.8 229 71.2
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 6.8e-86 321.2 215 73.5
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 8.9e-86 320.9 247 66.8
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 4.4e-85 318.5 216 72.2
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 4.4e-85 318.5 245 65.3
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 5.8e-85 318.2 241 66.8
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 5.8e-85 318.2 245 64.5
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.3e-84 317.0 243 67.9
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.7e-84 316.6 216 71.8
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.9e-84 315.8 243 67.5
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.9e-84 315.8 243 65.8
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 2.4e-83 312.8 229 68.6
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 2.4e-83 312.8 243 65.8
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 2.4e-83 312.8 239 65.7
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 4.1e-83 312.0 243 67.1
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 2.7e-82 309.3 243 64.6
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 3.5e-82 308.9 240 63.8
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.5e-82 308.9 218 70.6
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.5e-82 308.9 218 70.6
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 7.8e-82 307.8 216 70.8
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 1.3e-81 307.0 250 65.6
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.3e-81 307.0 244 64.3
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 2.3e-81 306.2 243 64.2
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 3.0e-81 305.8 244 65.2
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 3.9e-81 305.4 222 69.8
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 3.9e-81 305.4 225 68.0
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.1e-80 303.9 221 67.4
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.1e-80 303.9 209 69.4
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.9e-80 303.1 216 69.4
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 9.5e-80 300.8 237 65.0
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 9.5e-80 300.8 217 68.7
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 9.5e-80 300.8 212 68.4
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 8.0e-79 297.7 240 62.9
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 8.0e-79 297.7 238 63.9
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 1.4e-78 297.0 237 63.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.4e-78 297.0 240 62.9
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 2.3e-78 296.2 239 64.4
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.0e-78 295.4 215 69.3
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 4.0e-78 295.4 241 62.2
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 4.0e-78 295.4 219 68.0
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 4.0e-78 295.4 216 68.1
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.2e-77 293.9 241 62.2
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 2.0e-77 293.1 213 68.5
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.6e-77 292.7 207 69.1
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 2.6e-77 292.7 207 69.1
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 3.4e-77 292.4 220 65.5
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 3.4e-77 292.4 241 62.7
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 4.4e-77 292.0 239 62.3
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 5.8e-77 291.6 218 67.9
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 5.8e-77 291.6 211 67.8
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.5e-77 291.2 203 69.0
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 9.8e-77 290.8 207 68.6
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 9.8e-77 290.8 207 68.6
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 9.8e-77 290.8 207 68.6
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 2.9e-76 289.3 257 61.5
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 3.7e-76 288.9 206 69.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.9e-75 286.6 190 73.2
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.2e-75 285.8 190 72.6
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 7.0e-75 284.6 237 61.2
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.2e-74 283.9 219 64.8
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 4.6e-74 282.0 240 60.4
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 1.0e-73 280.8 211 66.4
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 1.3e-73 280.4 202 68.3
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 5.1e-73 278.5 228 62.3
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 5.1e-73 278.5 226 61.5
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 6.6e-73 278.1 240 60.4
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 4.3e-72 275.4 233 62.2
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 2.8e-71 272.7 208 64.4
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 6.2e-71 271.6 237 58.6
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 1.1e-70 270.8 177 74.0
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.1e-70 270.8 197 65.5
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.4e-70 270.4 212 63.2
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 1.8e-70 270.0 194 68.6
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 3.4e-69 265.8 221 61.5
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 5.8e-69 265.0 149 81.2
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.3e-68 263.8 165 76.4
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.2e-66 257.3 238 58.8
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 2.3e-65 253.1 212 60.8
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 8.6e-65 251.1 212 60.8
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 8.6e-65 251.1 156 76.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 2.5e-64 249.6 135 86.7
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.6e-58 230.3 226 54.4
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.1e-57 225.3 119 84.9
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 8.7e-57 224.6 238 51.3
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 3.3e-56 222.6 244 52.0
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 9.6e-56 221.1 134 71.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 8.4e-52 208.0 214 47.2
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 6.9e-46 188.3 228 48.2
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 3.4e-37 159.5 101 78.2
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 4.5e-37 159.1 94 75.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.9e-35 153.7 82 86.6
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.9e-35 153.7 82 86.6
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 3.5e-34 149.4 93 73.1
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 1.5e-32 144.1 151 50.3
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 7.1e-27 125.2 158 44.3
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 4.3e-24 115.9 123 52.0
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 2.4e-22 110.2 54 94.4
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 2.1e-18 97.1 68 69.1
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 3.8e-12 76.3 39 87.2


User provided reference genes

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