Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 5.9e-233 810.4 394 100.0
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 1.6e-198 696.0 387 85.3
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 6.8e-189 664.1 386 81.3
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 6.8e-189 664.1 386 81.3
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 3.7e-179 631.7 387 76.2
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 2.6e-172 609.0 387 74.7
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.9e-171 604.7 375 77.9
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.9e-171 604.7 375 77.9
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 4.3e-167 591.7 388 71.1
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 7.1e-162 574.3 389 69.2
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 3.0e-160 568.9 389 66.1
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 5.1e-160 568.2 389 65.8
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 1.1e-159 567.0 385 66.5
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 9.6e-159 563.9 394 65.7
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 1.6e-158 563.1 394 64.5
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 6.2e-158 561.2 394 65.7
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 6.2e-158 561.2 391 67.5
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 3.1e-157 558.9 384 66.7
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 5.8e-156 554.7 394 64.2
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 7.6e-156 554.3 389 67.4
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 3.8e-155 552.0 391 65.0
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 3.2e-154 548.9 394 62.4
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 3.2e-154 548.9 401 63.1
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 3.2e-154 548.9 394 65.0
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 2.7e-153 545.8 391 64.7
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 3.5e-153 545.4 392 64.0
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 7.8e-153 544.3 394 65.0
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 1.0e-152 543.9 394 64.0
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 1.0e-152 543.9 394 64.0
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.3e-152 543.5 392 64.0
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.3e-152 543.5 392 63.8
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 2.3e-152 542.7 392 63.8
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 3.9e-152 542.0 388 65.2
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 6.6e-152 541.2 391 63.4
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.5e-151 540.0 392 65.6
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 1.5e-151 540.0 394 61.9
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 3.3e-151 538.9 392 65.1
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 9.6e-151 537.3 395 63.0
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 9.6e-151 537.3 385 64.7
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 1.3e-150 537.0 394 62.7
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 2.8e-150 535.8 393 63.4
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 3.6e-150 535.4 390 62.6
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 3.6e-150 535.4 393 63.6
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 4.8e-150 535.0 393 62.6
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.4e-149 533.5 390 63.6
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 6.9e-149 531.2 395 61.5
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 6.9e-149 531.2 392 64.8
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 4.5e-148 528.5 392 63.3
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 5.8e-148 528.1 390 62.8
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 9.9e-148 527.3 396 62.4
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 1.3e-147 526.9 395 61.3
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 2.9e-147 525.8 395 60.8
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 4.9e-147 525.0 396 61.6
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 6.4e-147 524.6 390 60.8
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 6.4e-147 524.6 389 61.2
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 6.4e-147 524.6 389 61.2
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 8.4e-147 524.2 389 61.2
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.4e-146 523.5 394 61.9
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 1.9e-146 523.1 389 60.9
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 1.9e-146 523.1 389 60.9
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 3.2e-146 522.3 403 61.0
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 4.2e-146 521.9 395 60.0
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 4.2e-146 521.9 392 61.5
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 4.2e-146 521.9 391 59.8
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 1.6e-145 520.0 395 59.7
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 1.0e-144 517.3 394 59.6
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 3.9e-144 515.4 395 60.0
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 3.3e-143 512.3 391 61.4
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 9.6e-143 510.8 394 59.4
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 2.1e-142 509.6 394 59.1
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 6.2e-142 508.1 394 58.9
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 8.1e-142 507.7 393 61.1
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 8.1e-142 507.7 388 60.3
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 8.1e-142 507.7 387 58.9
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 1.1e-141 507.3 389 59.9
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 1.1e-141 507.3 394 58.4
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 1.8e-141 506.5 394 60.9
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 4.0e-141 505.4 388 61.6
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 1.2e-140 503.8 397 57.9
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 2.6e-140 502.7 394 58.6
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 3.4e-140 502.3 395 59.2
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 7.6e-140 501.1 378 59.8
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.7e-139 500.0 392 58.4
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 2.2e-139 499.6 395 57.7
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 2.2e-139 499.6 396 59.3
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 2.2e-139 499.6 384 61.2
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 6.4e-139 498.0 394 58.6
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 6.4e-139 498.0 395 58.2
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 8.4e-139 497.7 383 58.5
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.4e-138 496.9 375 62.9
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 1.4e-138 496.9 396 58.3
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 9.3e-138 494.2 395 58.0
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 9.3e-138 494.2 392 58.4
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 2.1e-137 493.0 390 57.9
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 2.1e-137 493.0 395 60.5
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 4.6e-137 491.9 394 57.6
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 1.0e-136 490.7 391 56.5
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 3.0e-136 489.2 391 56.3
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 8.7e-136 487.6 404 56.4
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.5e-135 486.9 375 58.9
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 2.5e-135 486.1 395 56.2
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 2.1e-134 483.0 397 57.9
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 1.8e-133 479.9 395 56.7
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 1.2e-132 477.2 387 57.9
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 4.5e-132 475.3 387 57.1
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 1.0e-131 474.2 393 57.8
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 2.2e-131 473.0 393 54.7
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 2.2e-131 473.0 396 56.3
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 2.9e-131 472.6 386 56.7
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 6.5e-131 471.5 390 56.9
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 6.5e-131 471.5 380 57.1
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 1.4e-130 470.3 403 55.1
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 1.9e-130 469.9 402 56.5
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 5.5e-130 468.4 399 56.1
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 3.9e-128 462.2 389 54.2
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 2.5e-127 459.5 385 54.5
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 6.3e-126 454.9 391 54.5
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 3.1e-125 452.6 391 54.7
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.9e-114 416.8 402 50.5
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 2.1e-113 413.3 392 50.0
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 1.4e-112 410.6 252 76.6
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 1.8e-112 410.2 391 50.6
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 2.5e-106 389.8 393 49.4
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 2.1e-105 386.7 391 50.1
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 6.1e-105 385.2 367 50.4
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 2.0e-103 380.2 392 48.5
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 4.4e-103 379.0 393 49.9
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 1.2e-100 370.9 401 43.4
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 4.5e-100 369.0 406 43.8
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 7.2e-98 361.7 397 43.6
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 1.0e-96 357.8 395 49.4
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 7.7e-92 341.7 388 42.0
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 3.2e-90 336.3 396 41.4
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 9.1e-85 318.2 379 41.7
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 4.2e-82 309.3 357 47.6
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 4.1e-77 292.7 307 49.2
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 2.0e-68 263.8 387 38.8
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 7.8e-68 261.9 383 38.6
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 1.7e-67 260.8 380 38.9
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 3.0e-67 260.0 163 71.2
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 9.5e-66 255.0 392 37.8
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 8.9e-64 248.4 388 39.4
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 1.7e-62 244.2 186 59.7
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 8.6e-59 231.9 219 53.9
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 2.1e-57 227.3 429 31.7
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.3e-42 176.4 386 29.0
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 1.6e-33 147.9 113 60.2
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 1.6e-33 147.9 143 49.7
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 5.4e-29 132.9 96 62.5
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 3.9e-27 126.7 79 75.9
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 2.8e-25 120.6 317 26.5
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 6.7e-19 99.4 419 25.1
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 7.6e-15 85.9 45 88.9
Psat0s2347g0040 Pisum sativum HOM05D004578 ORTHO05D005529 4.6e-12 76.6 159 35.8
VMungo1041G0001 Vigna mungo HOM05D004578 ORTHO05D005529 8.2e-09 65.9 49 63.3
COL.COLO4_30024 Corchorus olitorius HOM05D004578 ORTHO05D005529 4.1e-08 63.5 40 70.0
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 2.0e-07 61.2 404 22.5
Psat2g156560 Pisum sativum HOM05D000020 ORTHO05D321553 2.0e-07 61.2 47 61.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.3e-06 58.5 226 24.8
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 6.5e-06 56.2 427 23.7


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