Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12248 Trifolium pratense HOM05D000268 ORTHO05D004469 1.8e-122 442.6 218 100.0
TPR.G31552 Trifolium pratense HOM05D000268 ORTHO05D004469 2.2e-27 126.7 143 53.8
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 4.2e-23 112.5 245 34.7
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 1.6e-22 110.5 248 32.7
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 1.6e-22 110.5 246 34.1
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 1.0e-21 107.8 249 33.3
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 2.3e-21 106.7 251 30.7
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 3.9e-21 105.9 245 33.1
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 6.7e-21 105.1 248 33.1
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 2.0e-20 103.6 250 32.0
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 2.6e-20 103.2 240 33.8
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 4.4e-20 102.4 244 29.9
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 1.7e-19 100.5 241 32.8
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 2.8e-19 99.8 242 32.6
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 3.7e-19 99.4 248 30.2
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 1.8e-18 97.1 240 32.5
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 1.8e-18 97.1 240 32.5
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 1.8e-18 97.1 240 32.5
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 3.1e-18 96.3 192 34.4
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 3.1e-18 96.3 192 34.4
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 4.5e-17 92.4 119 40.3
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 2.9e-16 89.7 238 29.8
HPP92_007809 Vanilla planifolia HOM05D000268 ORTHO05D004469 6.5e-16 88.6 248 29.4
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 3.2e-15 86.3 199 36.2
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 5.5e-15 85.5 220 29.5
Psat4g090200 Pisum sativum HOM05D000268 ORTHO05D004469 1.0e-13 81.3 170 36.5
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 8.8e-13 78.2 229 28.8
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 2.6e-12 76.6 228 28.5
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 9.7e-12 74.7 208 31.2
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 1.3e-11 74.3 216 31.0
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.3e-11 74.3 208 31.7
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 2.2e-11 73.6 215 30.2
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 6.3e-11 72.0 211 31.8
Atru.chr3.488 Acer truncatum HOM05D000268 ORTHO05D004469 1.4e-10 70.9 206 30.1
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.8e-10 70.5 206 30.6
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 2.4e-10 70.1 203 30.0
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 2.4e-10 70.1 207 30.9
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 5.3e-10 68.9 212 28.3
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 7.0e-10 68.6 229 30.6
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 7.0e-10 68.6 219 26.9
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 9.1e-10 68.2 229 30.6
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 1.2e-09 67.8 196 31.1
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 1.2e-09 67.8 209 28.2
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.6e-09 67.4 204 30.4
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.0e-09 67.0 204 30.4
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 2.7e-09 66.6 199 32.7
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 3.5e-09 66.2 195 31.8
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 3.5e-09 66.2 200 31.0
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 3.5e-09 66.2 212 28.8
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 4.5e-09 65.9 204 27.0
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 5.9e-09 65.5 203 30.0
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 5.9e-09 65.5 204 30.4
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 5.9e-09 65.5 213 28.6
SHI08704 Sapria himalayana HOM05D000268 ORTHO05D004469 1.0e-08 64.7 206 26.7
Medtr4g132610 Medicago truncatula HOM05D000268 ORTHO05D004469 1.3e-08 64.3 121 36.4
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 1.7e-08 63.9 204 30.4
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 2.2e-08 63.5 196 31.6
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 2.9e-08 63.2 212 28.3
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 3.8e-08 62.8 208 29.3
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 3.8e-08 62.8 191 29.3
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 5.0e-08 62.4 203 29.1
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 5.0e-08 62.4 206 29.1
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 5.0e-08 62.4 202 29.2
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 6.5e-08 62.0 206 28.6
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 1.1e-07 61.2 208 28.4
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 1.1e-07 61.2 210 27.6
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.5e-07 60.8 199 29.6
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 1.5e-07 60.8 183 30.6
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 3.2e-07 59.7 203 28.6
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 3.2e-07 59.7 168 27.4
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 3.2e-07 59.7 192 28.1
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 5.5e-07 58.9 208 26.9
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 9.4e-07 58.2 206 27.7
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 9.4e-07 58.2 177 28.8
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 1.2e-06 57.8 114 31.6
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.6e-06 57.4 168 30.4
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.6e-06 57.4 168 30.4
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.6e-06 57.4 172 27.3
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 2.1e-06 57.0 206 26.2
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 2.7e-06 56.6 209 29.7
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 2.7e-06 56.6 79 39.2
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 3.6e-06 56.2 202 29.7
Eucgr.H01928 Eucalyptus grandis HOM05D000268 ORTHO05D004469 4.7e-06 55.8 209 25.8
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 6.1e-06 55.5 170 30.0
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 6.1e-06 55.5 183 31.1
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 6.1e-06 55.5 183 31.1


User provided reference genes

Program Settings