Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 3.4e-202 708.4 424 100.0
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 2.3e-102 376.7 428 55.8
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 1.1e-91 341.3 426 52.8
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 6.8e-86 322.0 441 50.8
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 1.3e-60 238.0 432 41.2
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 1.1e-59 235.0 417 42.4
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 1.0e-57 228.4 433 42.5
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 5.6e-56 222.6 425 40.9
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 2.8e-55 220.3 419 39.6
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 9.3e-51 205.3 450 38.0
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 7.9e-50 202.2 446 37.4
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 2.5e-48 197.2 446 37.4
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 2.2e-28 131.0 436 30.5
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 6.5e-28 129.4 434 30.6
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 2.5e-27 127.5 164 46.3
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 4.2e-27 126.7 161 47.8
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 7.2e-27 125.9 439 29.2
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 1.6e-26 124.8 418 29.2
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 2.1e-26 124.4 158 45.6
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 2.7e-26 124.0 159 47.2
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 2.7e-26 124.0 159 47.8
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 6.1e-26 122.9 156 47.4
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 7.9e-26 122.5 161 46.6
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 7.9e-26 122.5 166 42.8
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 1.4e-25 121.7 156 46.8
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 2.3e-25 120.9 144 46.5
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 3.0e-25 120.6 160 45.0
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 3.0e-25 120.6 160 45.0
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 3.9e-25 120.2 163 45.4
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 3.9e-25 120.2 163 44.2
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 5.1e-25 119.8 431 29.2
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 8.8e-25 119.0 164 45.1
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 8.8e-25 119.0 159 44.0
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 1.5e-24 118.2 156 44.9
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 1.5e-24 118.2 163 43.6
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 2.0e-24 117.9 158 44.9
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 2.0e-24 117.9 163 43.6
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 4.3e-24 116.7 158 43.7
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 7.4e-24 115.9 164 45.1
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 9.7e-24 115.5 164 43.9
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 1.3e-23 115.2 160 41.9
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 1.7e-23 114.8 142 45.8
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 2.2e-23 114.4 158 43.0
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 2.8e-23 114.0 163 44.2
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 4.8e-23 113.2 164 42.1
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 1.8e-22 111.3 141 44.7
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 1.8e-22 111.3 162 42.0
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 1.8e-22 111.3 117 56.4
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 2.4e-22 110.9 163 41.7
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 4.1e-22 110.2 137 48.9
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 9.1e-22 109.0 139 48.2
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 9.1e-22 109.0 159 44.7
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 1.2e-21 108.6 160 41.9
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 1.5e-21 108.2 139 46.8
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 4.5e-21 106.7 142 43.7
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 1.0e-20 105.5 217 36.4
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 2.2e-20 104.4 162 42.0
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 2.9e-20 104.0 149 42.3
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 3.8e-20 103.6 164 42.7
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 3.8e-20 103.6 105 50.5
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 6.5e-20 102.8 153 42.5
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 8.5e-20 102.4 149 40.3
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 1.4e-19 101.7 167 38.3
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 2.5e-19 100.9 177 36.2
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 4.2e-19 100.1 162 38.9
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.1e-18 97.8 166 43.4
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.1e-18 97.8 166 43.4
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 2.7e-18 97.4 111 51.4
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.7e-18 96.7 166 39.8
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 4.7e-18 96.7 166 39.8
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 6.1e-18 96.3 170 39.4
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 6.1e-18 96.3 166 38.0
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 6.1e-18 96.3 162 37.0
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 6.1e-18 96.3 162 37.0
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 6.1e-18 96.3 162 37.0
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.0e-17 95.5 127 44.9
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 3.0e-17 94.0 104 45.2
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 3.0e-17 94.0 168 36.3
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 3.9e-17 93.6 168 39.3
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 6.7e-17 92.8 102 47.1
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 6.7e-17 92.8 84 53.6
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 6.7e-17 92.8 84 53.6
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 1.1e-16 92.0 156 38.5
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.5e-16 91.7 166 38.0
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.5e-16 91.7 434 24.7
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 2.6e-16 90.9 445 25.4
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 3.3e-16 90.5 160 36.2
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 4.4e-16 90.1 84 52.4
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 7.4e-16 89.4 432 23.1
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 2.2e-15 87.8 170 34.7
VMungo1215G2891 Vigna mungo HOM05D006943 ORTHO05D008565 3.7e-15 87.0 136 41.2
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 4.8e-15 86.7 161 36.6
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 6.3e-15 86.3 168 35.7
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 8.2e-15 85.9 152 35.5
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 1.1e-14 85.5 165 35.2
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 3.1e-14 84.0 151 34.4
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 7.0e-14 82.8 434 23.7
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 3.5e-13 80.5 59 66.1
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 4.5e-13 80.1 116 41.4
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 2.1e-10 71.2 168 30.4
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 1.8e-09 68.2 54 59.3
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 3.0e-09 67.4 89 41.6
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 3.9e-09 67.0 83 44.6
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.3e-08 63.9 165 30.9
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 3.7e-07 60.5 65 43.1
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 5.3e-06 56.6 148 35.1


User provided reference genes

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