Gene: Sp7g29130
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp7g29130
- Transcript Identifier Sp7g29130.1
- Gene Type Coding gene
- Location ch7-5 : 1320487-1321552 : negative
Gene Family Information
- ID HOM05D006943
- #Genes/#Species 116/80
- Phylogenetic origin
- ID ORTHO05D008565
- #Genes/#Species 117/80
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp7g29130.v2.2
- pacid 45082782
Descriptions
- Description PF13837 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_4)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031935 | ISO | PLAZA Integrative Orthology | regulation of chromatin silencing | AT4G31270 |
| GO:0080111 | ISO | PLAZA Integrative Orthology | DNA demethylation | AT4G31270 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G31270 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT4G31270 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G31270 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G31270 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G31270 |
| GO:0000123 | ISO | PLAZA Integrative Orthology | histone acetyltransferase complex | AT4G31270 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044822 | Myb/SANT-like DNA-binding domain 4 |
| Mapman id | Description |
|---|---|
| 12.5.3.2.5 | Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.transposon-derived factor HDP2 |