Gene: Lsat_1_v5_gn_3_68681

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_3_68681
  • Transcript Identifier Lsat_1_v5_gn_3_68681.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_3 : 90813556-90814926 : positive

Gene Family Information

  • ID HOM05D006943
  • #Genes/#Species 116/80
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_3_68681.v5
  • pacid 38915443

Descriptions

  • Description PF13837 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031935
ISO
PLAZA Integrative Orthologyregulation of chromatin silencing AT4G31270
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT4G31270
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G31270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT4G31270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G31270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G31270
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G31270
GO:0000123
ISO
PLAZA Integrative Orthologyhistone acetyltransferase complex AT4G31270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044822 Myb/SANT-like DNA-binding domain 4
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.5.3.2.5 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.transposon-derived factor HDP2