Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 3.7e-123 445.3 295 100.0
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.8e-93 346.7 295 80.7
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.8e-93 346.7 295 80.7
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 2.1e-78 296.6 281 74.0
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 6.9e-77 291.6 225 89.3
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 9.0e-77 291.2 287 72.1
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.3e-72 276.6 282 72.0
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.1e-71 274.2 274 65.7
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.6e-70 270.4 281 70.1
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 5.8e-68 261.9 275 62.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 7.6e-68 261.5 226 73.0
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.3e-67 260.8 208 74.5
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 2.2e-67 260.0 234 69.2
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 6.4e-67 258.5 251 65.3
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.4e-66 257.3 234 67.5
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.4e-66 256.5 223 75.8
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 3.2e-66 256.1 234 68.4
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 4.2e-66 255.8 224 66.5
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 7.1e-66 255.0 273 56.8
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 9.3e-66 254.6 238 59.7
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.6e-65 253.8 230 77.4
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 7.9e-65 251.5 286 55.9
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.3e-63 246.1 236 66.5
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 3.3e-63 246.1 234 70.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 7.4e-63 245.0 227 71.8
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 4.8e-62 242.3 232 76.7
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 8.1e-62 241.5 222 73.4
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 1.1e-61 241.1 224 66.5
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.4e-61 240.7 279 58.8
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 5.3e-61 238.8 228 62.7
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 4.5e-60 235.7 226 69.0
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 4.5e-60 235.7 273 51.3
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 3.8e-59 232.6 223 59.2
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.8e-59 232.6 222 75.2
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.1e-58 231.1 229 73.8
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.1e-58 231.1 249 63.9
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.4e-58 230.7 223 63.7
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 4.2e-58 229.2 271 62.0
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 7.1e-58 228.4 226 65.5
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 7.1e-58 228.4 249 63.9
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 9.3e-58 228.0 276 52.5
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.6e-57 227.3 280 52.9
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 4.6e-57 225.7 224 57.6
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 4.6e-57 225.7 236 70.8
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.3e-56 224.2 223 65.5
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.3e-56 224.2 232 56.9
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.3e-56 223.4 238 55.5
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 2.3e-56 223.4 229 74.7
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 3.9e-56 222.6 224 60.7
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.1e-56 222.2 237 57.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 5.1e-56 222.2 232 55.6
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 8.7e-56 221.5 224 67.4
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.1e-55 221.1 230 58.7
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 1.1e-55 221.1 238 54.6
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 1.1e-55 221.1 238 54.6
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 1.1e-55 221.1 238 54.6
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.9e-55 220.3 214 71.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.9e-55 220.3 220 54.5
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.3e-55 219.5 223 68.6
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.3e-55 219.5 234 61.1
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 4.3e-55 219.2 265 61.5
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.3e-55 219.2 223 73.5
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 5.6e-55 218.8 238 54.2
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.8e-54 216.5 228 58.3
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.8e-54 216.5 196 55.6
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 3.7e-54 216.1 228 63.6
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 4.8e-54 215.7 222 61.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.4e-53 214.2 228 65.8
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 4.0e-53 212.6 236 63.6
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 5.3e-53 212.2 222 66.2
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.5e-52 210.7 231 71.9
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.0e-52 210.3 228 55.7
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.7e-51 207.2 168 73.2
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.9e-51 206.5 231 60.6
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.5e-51 205.3 239 50.2
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.2e-50 203.0 224 58.0
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 2.7e-49 199.9 150 74.0
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.5e-49 199.5 224 58.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.8e-48 197.2 232 55.2
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.1e-47 194.5 214 69.2
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.1e-47 194.5 214 69.2
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 1.1e-47 194.5 227 59.0
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.9e-47 193.7 163 61.3
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.5e-47 193.4 163 67.5
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 5.7e-47 192.2 222 66.7
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.4e-45 187.6 243 48.6
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.2e-44 184.5 156 67.9
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.5e-44 184.1 229 44.5
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.4e-44 183.0 224 68.3
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 4.5e-44 182.6 145 65.5
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 7.7e-44 181.8 219 63.5
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.0e-43 181.4 225 51.6
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 2.2e-43 180.3 224 51.3
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 7.9e-41 171.8 270 44.4
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 5.1e-40 169.1 225 51.1
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 6.7e-40 168.7 236 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 8.8e-40 168.3 231 55.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.3e-38 164.5 163 64.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 3.4e-36 156.4 145 62.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 4.2e-34 149.4 222 52.3
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 5.5e-34 149.1 214 65.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 7.2e-34 148.7 145 52.4
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.0e-32 144.8 223 43.5
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 5.7e-31 139.0 224 54.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.0e-27 128.3 224 47.8
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.7e-27 127.5 103 58.3
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.0e-24 118.2 124 49.2
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 6.7e-24 115.5 259 47.5
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.3e-22 111.3 105 64.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.7e-22 110.9 144 42.4
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.8e-22 109.4 119 67.2
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.9e-19 100.1 224 39.3
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 8.0e-17 92.0 213 46.5
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.4e-16 91.3 100 64.0
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.8e-13 80.9 136 41.2
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.7e-11 74.3 43 76.7
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 6.5e-11 72.4 90 43.3
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.3e-06 58.2 55 50.9
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.7e-06 57.8 63 46.0
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 6.3e-06 55.8 52 51.9


User provided reference genes

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