Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.3e-118 429.1 243 100.0
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 8.0e-39 164.9 116 69.0
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.0e-38 164.5 116 70.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 4.0e-38 162.5 116 69.8
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.6e-37 159.8 115 67.8
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 4.4e-37 159.1 116 69.0
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.2e-36 156.8 116 67.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 4.1e-35 152.5 115 66.1
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 5.3e-35 152.1 116 65.5
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.2e-34 151.0 116 64.7
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.6e-34 150.6 116 68.1
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.7e-34 149.8 116 65.5
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.5e-34 149.1 108 69.4
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.3e-33 147.5 116 62.1
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.3e-33 147.5 115 64.3
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.7e-33 147.1 116 63.8
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.7e-33 147.1 116 63.8
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.9e-33 146.4 116 62.9
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 2.9e-33 146.4 116 62.9
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.1e-32 144.4 116 63.8
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.1e-32 144.4 116 63.8
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.5e-32 144.1 116 61.2
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.5e-32 144.1 118 63.6
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.5e-32 143.3 116 63.8
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.5e-32 143.3 116 62.1
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 5.5e-32 142.1 116 58.6
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 7.2e-32 141.7 116 62.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 1.6e-31 140.6 116 59.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.1e-31 140.2 116 58.6
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 3.6e-31 139.4 116 60.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.6e-31 139.4 116 58.6
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 4.7e-31 139.0 116 62.9
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 6.1e-31 138.7 116 58.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.0e-30 137.9 116 59.5
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 1.0e-30 137.9 116 58.6
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.4e-30 137.5 116 61.2
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.8e-30 137.1 116 60.3
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.3e-30 136.7 116 61.2
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.3e-30 136.7 116 56.0
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.0e-30 136.3 116 57.8
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.0e-30 136.3 116 60.3
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.0e-30 136.3 116 61.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 4.0e-30 136.0 117 59.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 5.2e-30 135.6 114 58.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 5.2e-30 135.6 118 60.2
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 6.8e-30 135.2 115 60.9
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 6.8e-30 135.2 115 54.8
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 6.8e-30 135.2 116 58.6
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.8e-30 135.2 116 58.6
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.8e-30 135.2 116 58.6
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 6.8e-30 135.2 116 55.2
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 8.8e-30 134.8 116 58.6
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 8.8e-30 134.8 108 63.0
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 8.8e-30 134.8 108 63.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.5e-29 134.0 116 55.2
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.0e-29 133.7 116 59.5
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.0e-29 133.7 116 57.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 2.0e-29 133.7 116 56.9
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.0e-29 133.7 116 58.6
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 2.0e-29 133.7 116 58.6
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.6e-29 133.3 116 59.5
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 3.4e-29 132.9 116 56.0
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 4.4e-29 132.5 116 58.6
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 5.7e-29 132.1 116 55.2
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 7.5e-29 131.7 116 54.3
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 7.5e-29 131.7 116 57.8
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.5e-29 131.7 116 56.9
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.8e-29 131.3 116 55.2
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 9.8e-29 131.3 116 55.2
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.3e-28 131.0 116 59.5
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.2e-28 130.2 116 57.8
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 2.2e-28 130.2 116 55.2
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 3.7e-28 129.4 116 56.0
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.1e-27 127.9 116 56.0
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.8e-27 127.1 112 55.4
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.4e-27 126.7 116 57.8
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 2.4e-27 126.7 118 57.6
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 2.4e-27 126.7 116 57.8
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 7.0e-27 125.2 118 57.6
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 9.1e-27 124.8 118 57.6
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.2e-26 124.4 116 54.3
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 1.6e-26 124.0 118 52.5
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 5.9e-26 122.1 116 55.2
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 5.9e-26 122.1 115 52.2
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 7.7e-26 121.7 115 51.3
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 2.9e-25 119.8 116 54.3
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 3.8e-25 119.4 118 54.2
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 3.3e-24 116.3 116 51.7
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 3.3e-24 116.3 118 51.7
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 4.2e-24 115.9 118 50.8
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 5.5e-24 115.5 116 53.4
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 9.5e-24 114.8 116 51.7
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 9.5e-24 114.8 116 52.6
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.6e-23 114.0 116 50.9
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 2.1e-23 113.6 116 52.6
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 3.6e-23 112.8 116 51.7
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 3.6e-23 112.8 116 51.7
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 8.0e-23 111.7 116 50.9
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 1.0e-22 111.3 106 52.8
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-22 110.5 70 75.7
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 3.0e-22 109.8 119 52.1
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 3.0e-22 109.8 119 52.1
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 6.8e-22 108.6 116 51.7
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 8.9e-22 108.2 87 64.4
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.4e-21 106.3 67 71.6
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.1e-19 101.3 116 47.4
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.8e-19 100.5 116 44.8
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.5e-18 96.3 57 78.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.0e-17 94.7 108 47.2
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 8.6e-17 91.7 116 42.2
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 4.0e-14 82.8 64 59.4
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 3.7e-12 76.3 129 34.9
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 3.2e-11 73.2 190 33.2
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.2e-11 73.2 118 34.7
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 7.3e-08 62.0 123 32.5
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 9.5e-08 61.6 131 27.5


User provided reference genes

Program Settings