Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 5.7e-172 607.4 298 100.0
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 9.8e-156 553.5 298 90.9
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.8e-154 549.3 299 90.0
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 3.1e-154 548.5 298 90.3
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.6e-150 536.2 298 86.6
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 2.8e-150 535.4 299 87.3
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 4.7e-150 534.6 298 88.3
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.8e-149 532.7 298 87.6
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 7.5e-148 527.3 309 85.1
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.3e-147 526.6 299 86.6
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 4.1e-146 521.5 298 85.2
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 5.4e-146 521.2 302 85.8
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 7.0e-146 520.8 300 85.7
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 1.2e-145 520.0 298 85.6
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 2.0e-145 519.2 298 84.2
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.0e-145 519.2 298 85.6
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 5.9e-145 517.7 298 84.6
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 7.8e-145 517.3 299 84.9
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 1.0e-144 516.9 298 84.9
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 1.0e-144 516.9 298 84.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 2.3e-144 515.8 298 86.2
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 3.0e-144 515.4 298 84.9
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 3.9e-144 515.0 329 78.7
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 5.0e-144 514.6 298 84.2
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.0e-144 514.6 299 84.6
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 8.6e-144 513.8 298 82.2
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 1.9e-143 512.7 292 84.6
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 2.5e-143 512.3 299 83.9
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 2.5e-143 512.3 298 82.2
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 2.5e-143 512.3 299 84.6
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.6e-142 509.6 299 85.3
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.8e-142 508.8 301 82.7
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 3.6e-142 508.4 293 84.3
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.7e-142 508.1 298 83.6
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 4.7e-142 508.1 298 83.9
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 8.0e-142 507.3 300 84.0
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 8.9e-141 503.8 298 81.9
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 1.5e-140 503.1 301 82.4
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 4.4e-140 501.5 298 82.6
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 5.8e-140 501.1 290 82.4
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 5.8e-140 501.1 298 81.9
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 7.5e-140 500.7 298 82.2
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 9.8e-140 500.4 331 75.8
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.3e-139 500.0 298 82.2
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.7e-139 499.6 298 82.2
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 2.9e-139 498.8 302 81.8
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 8.3e-139 497.3 298 81.9
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 1.4e-138 496.5 297 80.8
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.9e-138 496.1 298 80.5
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.9e-138 496.1 298 81.2
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.1e-138 495.0 298 81.2
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 5.4e-138 494.6 298 81.5
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 7.0e-138 494.2 298 81.5
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 9.2e-138 493.8 299 81.3
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 1.6e-137 493.0 295 82.0
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.0e-137 492.7 293 81.2
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 2.7e-137 492.3 297 79.1
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 3.5e-137 491.9 299 80.6
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 1.0e-136 490.3 298 79.5
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.7e-136 489.6 294 81.6
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 2.3e-136 489.2 302 80.1
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 9.5e-135 483.8 311 78.8
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.6e-134 483.0 298 79.9
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.6e-134 483.0 299 78.9
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 2.1e-134 482.6 300 80.0
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.1e-134 482.6 301 79.1
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 2.8e-134 482.3 281 85.4
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 6.2e-134 481.1 282 83.0
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 8.1e-134 480.7 300 79.0
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 8.1e-134 480.7 333 74.2
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 8.9e-133 477.2 298 81.2
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 4.4e-132 474.9 291 79.0
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 7.5e-132 474.2 291 79.0
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 7.5e-132 474.2 291 78.7
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 7.5e-132 474.2 291 78.7
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 7.5e-132 474.2 291 78.7
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 7.5e-132 474.2 291 78.7
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 7.5e-132 474.2 298 78.2
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 9.8e-132 473.8 268 89.2
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 4.9e-131 471.5 298 76.5
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.4e-130 469.2 298 76.2
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 2.4e-130 469.2 291 77.0
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.3e-128 463.4 298 74.5
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.5e-127 459.1 249 88.8
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 1.2e-126 456.8 291 76.6
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 5.2e-125 451.4 239 91.6
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 2.0e-124 449.5 279 79.9
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 2.7e-121 439.1 247 88.3
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 1.3e-120 436.8 270 80.7
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 3.9e-120 435.3 294 70.7
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.1e-119 433.7 237 87.3
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 1.8e-117 426.4 291 72.5
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 8.9e-117 424.1 267 76.4
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 3.4e-116 422.2 294 71.1
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 8.4e-115 417.5 241 83.4
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 2.4e-109 399.4 222 85.6
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 9.0e-101 370.9 238 76.5
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 1.2e-92 344.0 294 57.8
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 3.4e-92 342.4 410 50.0
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 2.9e-91 339.3 288 58.0
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 6.5e-91 338.2 287 58.5
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 6.0e-89 331.6 282 67.0
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 2.4e-85 319.7 208 75.0
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 2.2e-67 260.0 258 60.5
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.9e-66 256.9 272 51.8
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.7e-59 233.8 153 78.4
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 1.8e-56 223.8 291 41.2
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 5.7e-55 218.8 121 88.4
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 2.8e-54 216.5 242 45.0
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 5.0e-51 205.7 117 78.6
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 6.1e-49 198.7 195 52.8
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.2e-44 184.5 218 50.9
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 9.5e-42 174.9 175 57.7
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 1.1e-37 161.4 238 42.4
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 1.3e-35 154.5 111 69.4
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 1.3e-27 127.9 73 80.8
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 5.0e-27 125.9 82 78.0
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 1.0e-19 101.7 52 90.4
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 3.0e-19 100.1 60 83.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.5e-18 97.8 54 81.5
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.4e-16 91.3 55 80.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 1.2e-15 88.2 52 75.0
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 2.6e-15 87.0 190 36.3
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 5.8e-15 85.9 146 37.7
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.1e-13 81.6 59 69.5
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 1.2e-12 78.2 59 66.1
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 6.0e-12 75.9 54 70.4
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 9.5e-10 68.6 54 68.5
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 1.6e-09 67.8 170 29.4
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 4.7e-09 66.2 166 31.3
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 8.1e-09 65.5 162 32.1
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 5.2e-08 62.8 170 28.8
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 1.2e-07 61.6 161 30.4
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.0e-07 60.8 87 44.8
Potri.010G239500 Populus trichocarpa HOM05D005598 ORTHO05D006587 3.4e-07 60.1 59 55.9
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 7.6e-07 58.9 48 64.6
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 2.9e-06 57.0 26 88.5
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 6.4e-06 55.8 42 66.7


User provided reference genes

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