Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.9e-94 349.7 262 100.0
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.2e-50 203.4 107 91.6
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.2e-50 203.4 107 91.6
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 2.8e-50 203.0 153 69.9
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 6.3e-50 201.8 107 90.7
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 8.3e-50 201.4 107 90.7
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 1.1e-49 201.1 109 88.1
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 1.4e-49 200.7 107 89.7
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 1.4e-49 200.7 107 89.7
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.4e-49 200.7 107 89.7
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 1.4e-49 200.7 107 89.7
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 1.4e-49 200.7 107 89.7
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 1.8e-49 200.3 107 89.7
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.8e-49 200.3 107 89.7
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 1.8e-49 200.3 107 89.7
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 2.4e-49 199.9 107 88.8
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 3.2e-49 199.5 107 89.7
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 3.2e-49 199.5 107 88.8
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 3.2e-49 199.5 107 89.7
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 88.8
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 87.9
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 88.8
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 88.8
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 88.8
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 4.1e-49 199.1 107 88.8
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 5.4e-49 198.7 106 89.6
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 5.4e-49 198.7 107 89.7
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 5.4e-49 198.7 107 88.8
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 5.4e-49 198.7 107 88.8
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 5.4e-49 198.7 107 88.8
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 5.4e-49 198.7 107 89.7
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 7.0e-49 198.4 107 87.9
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 7.0e-49 198.4 107 87.9
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.2e-49 198.0 107 88.8
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.2e-49 198.0 107 88.8
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 9.2e-49 198.0 107 88.8
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 9.2e-49 198.0 107 88.8
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 9.2e-49 198.0 107 87.9
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 1.2e-48 197.6 107 88.8
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.2e-48 197.6 106 88.7
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 1.2e-48 197.6 106 88.7
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 1.2e-48 197.6 106 88.7
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 1.2e-48 197.6 106 88.7
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 1.6e-48 197.2 107 86.9
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 1.6e-48 197.2 107 87.9
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 1.6e-48 197.2 107 86.9
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 1.6e-48 197.2 107 87.9
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 2.0e-48 196.8 107 88.8
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 2.0e-48 196.8 107 87.9
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 2.0e-48 196.8 106 88.7
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 2.0e-48 196.8 107 86.9
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 2.0e-48 196.8 107 86.9
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 3.5e-48 196.1 106 87.7
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 87.9
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 87.9
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 87.9
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 87.9
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 4.5e-48 195.7 107 86.9
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 5.9e-48 195.3 106 87.7
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 7.8e-48 194.9 107 86.9
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.8e-48 194.9 107 86.9
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.8e-48 194.9 107 86.9
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 7.8e-48 194.9 107 87.9
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 7.8e-48 194.9 107 87.9
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.0e-47 194.5 107 87.9
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 1.0e-47 194.5 107 86.0
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 1.3e-47 194.1 107 86.0
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 1.3e-47 194.1 107 86.0
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 1.3e-47 194.1 107 86.9
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 1.3e-47 194.1 107 86.9
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 1.7e-47 193.7 107 86.9
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 1.7e-47 193.7 107 86.9
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 2.3e-47 193.4 106 86.8
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 2.3e-47 193.4 107 86.0
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 2.3e-47 193.4 107 86.0
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 2.9e-47 193.0 107 85.0
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 2.9e-47 193.0 107 85.0
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 2.9e-47 193.0 107 85.0
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 2.9e-47 193.0 107 85.0
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.9e-47 193.0 119 81.5
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 2.9e-47 193.0 107 86.9
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 3.9e-47 192.6 107 85.0
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 6.6e-47 191.8 107 86.9
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 6.6e-47 191.8 107 86.9
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 6.6e-47 191.8 107 86.9
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 6.6e-47 191.8 106 85.8
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.1e-46 191.0 101 90.1
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 1.1e-46 191.0 106 85.8
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.5e-46 190.7 107 86.9
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 3.3e-46 189.5 107 86.9
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 3.3e-46 189.5 107 84.1
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 4.3e-46 189.1 107 86.0
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 4.3e-46 189.1 107 85.0
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 2.1e-45 186.8 107 84.1
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 4.7e-45 185.7 122 75.4
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 8.0e-45 184.9 106 84.0
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 3.7e-42 176.0 110 80.0
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 3.7e-42 176.0 110 80.0
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.6e-40 170.6 92 87.0
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 7.3e-38 161.8 95 82.1
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 1.6e-37 160.6 110 75.5
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 1.6e-37 160.6 95 82.1
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.4e-36 157.5 110 71.8
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 5.2e-36 155.6 105 74.3
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 7.5e-35 151.8 106 73.6
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.7e-34 150.6 155 54.8
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 3.7e-34 149.4 110 64.5
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 1.9e-25 120.6 76 78.9
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 1.9e-25 120.6 76 78.9
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 1.6e-24 117.5 60 90.0
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 7.8e-24 115.2 61 86.9
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 5.4e-17 92.4 50 86.0
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 5.1e-15 85.9 108 49.1
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 6.9e-12 75.5 43 83.7
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 1.3e-10 71.2 102 46.1
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 1.1e-09 68.2 51 70.6
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 2.7e-08 63.5 38 78.9
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 4.6e-08 62.8 38 76.3
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 4.6e-08 62.8 39 76.9


User provided reference genes

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