Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0773 Trochodendron aralioides HOM05D004447 ORTHO05D005973 1.2e-91 339.7 163 100.0
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 2.5e-65 252.3 130 92.3
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 3.3e-65 251.9 130 91.5
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 5.7e-65 251.1 130 90.8
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 9.7e-65 250.4 130 90.0
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 1.4e-63 246.5 130 90.0
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 1.8e-63 246.1 130 88.5
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 1.8e-63 246.1 131 87.0
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 2.4e-63 245.7 130 88.5
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 2.4e-63 245.7 130 89.2
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.1e-63 245.0 130 89.2
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 1.2e-62 243.4 130 88.5
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 1.5e-62 243.0 130 88.5
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 5.9e-62 241.1 128 89.1
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 5.9e-62 241.1 130 89.2
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 7.7e-62 240.7 130 88.5
COL.COLO4_24889 Corchorus olitorius HOM05D004447 ORTHO05D005973 1.0e-61 240.4 130 86.9
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 1.0e-61 240.4 130 87.7
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 1.3e-61 240.0 130 86.9
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 2.2e-61 239.2 130 86.2
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 2.9e-61 238.8 130 87.7
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 5.0e-61 238.0 130 87.7
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 8.5e-61 237.3 137 83.9
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 8.5e-61 237.3 130 86.2
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 1.1e-60 236.9 130 86.2
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 1.4e-60 236.5 129 85.3
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 1.4e-60 236.5 132 85.6
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.5e-60 235.7 130 86.9
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 3.2e-60 235.3 130 85.4
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 4.2e-60 235.0 144 79.2
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 9.4e-60 233.8 129 84.5
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 9.4e-60 233.8 136 80.9
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 1.2e-59 233.4 130 86.2
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 1.2e-59 233.4 130 86.2
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 1.2e-59 233.4 130 81.5
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 1.6e-59 233.0 136 80.9
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 2.1e-59 232.6 136 80.1
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 3.6e-59 231.9 128 87.5
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 4.7e-59 231.5 130 84.6
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 6.1e-59 231.1 130 81.5
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 7.9e-59 230.7 136 80.1
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 7.9e-59 230.7 132 80.3
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 1.0e-58 230.3 130 83.1
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 1.4e-58 229.9 133 82.0
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 2.3e-58 229.2 129 82.9
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 3.0e-58 228.8 130 82.3
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 3.0e-58 228.8 143 75.5
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 5.1e-58 228.0 130 83.8
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 6.7e-58 227.6 130 82.3
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 8.8e-58 227.3 130 82.3
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 1.1e-57 226.9 129 82.2
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 1.5e-57 226.5 131 80.9
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 1.5e-57 226.5 131 80.9
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 1.5e-57 226.5 130 83.1
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 2.0e-57 226.1 129 79.1
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 2.0e-57 226.1 129 80.6
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 2.0e-57 226.1 128 83.6
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 3.3e-57 225.3 130 80.8
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 4.4e-57 224.9 130 80.0
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 4.4e-57 224.9 127 83.5
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 2.2e-56 222.6 128 82.0
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 2.2e-56 222.6 128 82.0
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 2.2e-56 222.6 128 82.0
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 2.2e-56 222.6 128 82.0
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 2.2e-56 222.6 128 82.0
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 3.7e-56 221.9 128 82.0
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 3.7e-56 221.9 128 82.8
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 4.8e-56 221.5 130 78.5
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 4.8e-56 221.5 128 81.2
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 4.8e-56 221.5 127 82.7
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 6.3e-56 221.1 128 81.2
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 8.2e-56 220.7 128 80.5
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 8.2e-56 220.7 130 79.2
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 1.1e-55 220.3 130 80.0
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 1.4e-55 219.9 130 80.0
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 1.4e-55 219.9 131 80.9
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 1.8e-55 219.5 128 80.5
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 7.0e-55 217.6 127 81.9
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 1.2e-54 216.9 130 79.2
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.5e-54 216.5 128 78.1
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 2.6e-54 215.7 130 78.5
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 3.5e-54 215.3 149 71.1
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 2.9e-53 212.2 130 73.8
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 3.8e-53 211.8 127 78.7
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 1.2e-51 206.8 116 85.3
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 3.6e-51 205.3 135 75.6
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 6.7e-50 201.1 126 77.0
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 4.4e-49 198.4 114 80.7
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 1.3e-48 196.8 122 77.0
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.1e-44 183.7 108 79.6
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 1.9e-44 183.0 128 66.4
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 3.2e-44 182.2 128 64.1
FvH4_1g30421 Fragaria vesca HOM05D004447 ORTHO05D005973 2.1e-43 179.5 103 83.5
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 1.5e-41 173.3 108 75.0
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 4.8e-40 168.3 128 64.8
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 2.4e-39 166.0 128 64.1
vmacro17434 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 3.1e-39 165.6 190 51.6
PGSC0003DMG402012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 9.1e-39 164.1 92 78.3
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 1.7e-37 159.8 130 61.5
Nn2g15472 Nelumbo nucifera HOM05D004447 ORTHO05D005973 8.5e-37 157.5 128 63.3
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 9.4e-36 154.1 140 57.1
CBR_g41485 Chara braunii HOM05D004447 ORTHO05D005973 4.8e-32 141.7 127 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1065 Anthoceros agrestis HOM05D004447 ORTHO05D005973 3.1e-31 139.0 124 51.6
GSVIVG01025457001 Vitis vinifera HOM05D004447 ORTHO05D005973 7.0e-31 137.9 80 83.8
SHI27481 Sapria himalayana HOM05D004447 ORTHO05D005973 2.3e-26 122.9 85 68.2
Actinidia23963 Actinidia chinensis HOM05D004447 ORTHO05D058151 2.2e-24 116.3 78 67.9
Peaxi162Scf00862g00001 Petunia axillaris HOM05D004447 ORTHO05D005973 4.9e-24 115.2 151 49.0
GSVIVG01001925001 Vitis vinifera HOM05D004447 ORTHO05D005973 6.3e-24 114.8 68 82.4
AagrBONN_evm.TU.Sc2ySwM_362.493 Anthoceros agrestis HOM05D004447 ORTHO05D005973 5.0e-21 105.1 127 40.2
MD11G1197200 Malus domestica HOM05D004447 ORTHO05D005973 1.5e-20 103.6 111 51.4
FAN03G1122 Fragaria x ananassa HOM05D004447 ORTHO05D005973 4.3e-20 102.1 60 83.3
GSVIVG01001926001 Vitis vinifera HOM05D004447 ORTHO05D005973 4.3e-20 102.1 49 93.9
FAN10G0764 Fragaria x ananassa HOM05D004447 ORTHO05D005973 7.3e-20 101.3 56 89.3
ClCG08G000110 Citrullus lanatus HOM05D004447 ORTHO05D005973 2.1e-19 99.8 57 82.5
ClCG08G000120 Citrullus lanatus HOM05D004447 ORTHO05D005973 8.0e-19 97.8 49 83.7
FAN28G2360 Fragaria x ananassa HOM05D004447 ORTHO05D005973 2.0e-17 93.2 55 74.5
MCO08G197 Micromonas commoda HOM05D004447 ORTHO05D005973 7.0e-15 84.7 117 32.5
Actinidia23967 Actinidia chinensis HOM05D004447 ORTHO05D005973 1.0e-13 80.9 51 68.6
PRCOL_00004147 Prasinoderma coloniale HOM05D004447 ORTHO05D005973 7.5e-09 64.7 125 30.4
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 6.0e-06 55.1 27 85.2


User provided reference genes

Program Settings