Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.3e-142 508.8 246 100.0
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.9e-97 359.0 228 76.8
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.2e-95 353.6 230 74.3
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 3.6e-95 352.1 234 74.8
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 7.9e-95 350.9 230 74.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 7.4e-93 344.4 230 75.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 7.4e-93 344.4 232 72.4
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 8.2e-92 340.9 230 72.6
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.1e-91 340.5 230 74.3
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 2.9e-89 332.4 230 71.3
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.9e-89 332.4 242 70.7
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 5.0e-89 331.6 235 68.9
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.5e-88 329.3 230 71.3
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.2e-87 327.0 235 69.4
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.6e-87 326.6 230 71.7
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.7e-87 325.9 231 71.0
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 4.7e-87 325.1 230 69.6
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.0e-87 324.3 231 70.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.3e-86 322.8 231 71.4
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.6e-85 319.3 232 70.7
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 1.3e-84 317.0 230 67.8
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.4e-83 312.8 230 67.4
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 4.1e-83 312.0 232 68.1
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 1.6e-82 310.1 230 62.6
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.6e-82 310.1 226 67.3
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.0e-82 309.7 246 64.2
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 2.0e-82 309.7 261 62.1
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.7e-82 309.3 230 63.5
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 3.5e-82 308.9 229 67.2
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 4.5e-82 308.5 219 67.6
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 5.9e-82 308.1 230 65.2
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 5.9e-82 308.1 222 64.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.7e-82 307.8 234 66.2
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.0e-81 307.4 222 66.7
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.3e-81 307.0 222 67.6
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.7e-81 306.6 219 67.1
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.2e-81 306.2 219 67.6
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.2e-81 306.2 230 63.5
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.2e-81 306.2 230 63.5
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 3.8e-81 305.4 230 65.2
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 6.5e-81 304.7 207 72.9
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 6.5e-81 304.7 222 67.6
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 8.5e-81 304.3 221 64.3
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 8.5e-81 304.3 230 66.1
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 8.5e-81 304.3 230 62.6
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.1e-80 303.9 230 64.3
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.5e-80 303.5 222 67.1
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.5e-80 303.5 230 65.7
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.5e-80 302.8 230 62.2
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 3.2e-80 302.4 242 62.4
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 3.2e-80 302.4 219 67.6
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 7.2e-80 301.2 231 66.7
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.2e-79 300.4 223 67.3
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.2e-79 300.4 247 65.6
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.2e-79 300.4 247 65.6
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.6e-79 300.1 235 63.0
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.7e-79 299.3 230 64.8
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 3.6e-79 298.9 231 67.1
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.7e-79 298.5 230 64.8
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 8.0e-79 297.7 230 64.8
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.4e-78 297.0 234 62.0
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.8e-78 296.6 247 64.8
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 2.3e-78 296.2 230 61.7
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 4.0e-78 295.4 230 64.8
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 5.2e-78 295.0 230 63.9
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 8.8e-78 294.3 230 63.5
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 8.8e-78 294.3 222 66.2
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 2.6e-77 292.7 245 61.2
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 2.6e-77 292.7 245 61.2
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.3e-76 290.4 222 66.2
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.2e-76 289.7 230 62.6
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 3.7e-76 288.9 220 65.0
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.1e-75 285.4 226 63.7
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 7.0e-75 284.6 233 59.7
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.2e-74 283.9 233 63.1
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.7e-74 282.7 219 62.6
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 3.8e-73 278.9 222 64.0
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 5.0e-73 278.5 234 59.8
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 4.2e-72 275.4 219 62.6
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 4.2e-72 275.4 219 61.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.2e-71 273.9 219 60.7
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 1.6e-71 273.5 230 58.7
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.1e-71 273.1 230 58.3
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.7e-71 272.7 230 58.3
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 4.7e-71 271.9 230 58.3
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 4.7e-71 271.9 219 61.2
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 6.1e-71 271.6 162 83.3
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.0e-70 270.8 234 61.1
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.4e-70 270.4 219 60.3
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.4e-70 270.4 231 59.3
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 5.2e-70 268.5 232 58.2
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.5e-69 266.9 201 66.2
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.0e-69 266.5 234 62.0
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 3.4e-69 265.8 230 60.9
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 3.4e-69 265.8 230 60.9
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 3.7e-68 262.3 273 53.5
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 1.8e-67 260.0 231 57.1
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 3.8e-65 252.3 230 55.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 2.1e-63 246.5 222 57.7
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.7e-63 245.4 213 58.2
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.0e-62 244.2 218 58.3
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 2.0e-61 240.0 154 76.0
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.4e-61 239.2 231 52.8
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 6.4e-60 235.0 253 48.6
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.4e-51 206.5 177 60.5
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 5.0e-49 198.7 179 60.9
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.1e-47 193.4 124 74.2
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.2e-42 177.6 245 40.8
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 2.7e-42 176.4 256 42.6
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.0e-41 172.9 149 59.1
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.4e-38 164.1 97 78.4
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.2e-34 151.0 160 54.4
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 6.6e-33 145.2 169 48.5
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.1e-30 137.9 74 82.4
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.2e-28 130.2 178 43.3
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.2e-26 124.4 122 52.5
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.1e-25 119.0 125 46.4
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.9e-20 103.2 102 54.9
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.7e-12 77.4 52 75.0
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.2e-12 77.0 135 36.3
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.9e-12 75.9 52 73.1


User provided reference genes

Program Settings