Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 3.6e-194 681.4 346 100.0
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 2.5e-139 499.2 341 75.1
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 6.3e-130 468.0 347 71.5
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 4.7e-125 451.8 348 68.4
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 5.7e-123 444.9 351 66.4
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.6e-117 426.8 352 66.5
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 2.3e-116 422.9 349 63.9
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 8.8e-116 421.0 349 67.0
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 3.3e-115 419.1 344 65.4
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 5.7e-115 418.3 349 63.0
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.7e-114 416.8 358 63.7
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 2.2e-114 416.4 326 70.2
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 2.8e-114 416.0 350 64.9
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 2.8e-114 416.0 353 63.7
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 6.3e-114 414.8 344 65.4
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 3.1e-113 412.5 367 62.7
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 5.3e-113 411.8 353 64.9
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 5.9e-112 408.3 349 62.8
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.0e-111 407.5 345 62.9
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.3e-111 407.1 352 64.2
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 2.2e-111 406.4 349 63.3
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 6.5e-111 404.8 353 65.4
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 8.5e-111 404.4 345 62.0
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 7.2e-110 401.4 307 67.1
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 7.2e-110 401.4 354 63.3
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 8.0e-109 397.9 348 62.6
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 1.0e-108 397.5 346 62.1
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.8e-108 396.7 351 61.8
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 2.3e-108 396.4 354 61.9
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 4.0e-108 395.6 350 60.6
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 8.8e-108 394.4 351 60.7
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 8.8e-108 394.4 352 63.9
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.5e-107 393.7 350 60.3
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 4.4e-107 392.1 347 59.9
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.4e-107 392.1 352 60.2
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 5.7e-107 391.7 344 61.0
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 5.7e-107 391.7 350 60.0
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 7.5e-107 391.3 350 60.9
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 1.3e-106 390.6 349 60.5
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 1.7e-106 390.2 347 61.1
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 3.7e-106 389.0 345 61.4
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 1.1e-105 387.5 347 61.4
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 3.5e-104 382.5 354 59.9
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 1.5e-102 377.1 352 58.8
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 4.2e-102 375.6 346 59.8
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 9.4e-102 374.4 331 59.2
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 2.1e-101 373.2 345 59.1
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.7e-101 372.9 354 60.2
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 4.7e-101 372.1 303 63.7
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 6.1e-101 371.7 349 57.3
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 5.2e-100 368.6 349 58.2
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 8.8e-100 367.9 347 58.5
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 8.8e-100 367.9 347 57.3
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 2.6e-99 366.3 346 57.8
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 3.4e-99 365.9 355 58.3
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 4.4e-99 365.5 343 56.6
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 5.7e-99 365.2 346 58.1
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 9.8e-99 364.4 347 58.5
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.3e-98 364.0 348 58.0
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 2.8e-98 362.8 351 58.1
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 4.8e-98 362.1 327 58.4
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 5.4e-97 358.6 348 56.6
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 9.1e-97 357.8 322 59.3
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 2.0e-96 356.7 352 57.4
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 3.5e-96 355.9 327 60.2
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 3.5e-96 355.9 392 52.3
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 5.9e-96 355.1 344 57.3
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 7.7e-96 354.8 352 57.4
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.7e-95 353.6 348 56.3
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 3.8e-95 352.4 348 55.7
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 8.6e-95 351.3 359 56.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 3.6e-93 345.9 350 55.4
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 4.0e-92 342.4 352 55.7
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 5.2e-92 342.0 345 55.1
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 6.8e-92 341.7 306 58.2
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 4.4e-91 339.0 319 56.4
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 2.8e-90 336.3 299 57.9
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.1e-89 334.3 319 56.4
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 3.5e-88 329.3 405 49.4
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 3.5e-88 329.3 340 54.4
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 1.3e-87 327.4 342 51.8
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 2.5e-86 323.2 341 53.7
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 8.0e-85 318.2 294 56.5
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 1.6e-80 303.9 346 49.4
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 1.0e-79 301.2 328 48.5
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 2.3e-76 290.0 288 52.8
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 8.6e-71 271.6 353 47.9
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 9.5e-70 268.1 347 49.6
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 1.1e-68 264.6 346 46.5
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 2.5e-62 243.4 218 59.2
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 9.5e-62 241.5 249 51.8
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 2.8e-61 240.0 298 46.0
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.4e-57 226.9 213 54.9
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 1.1e-54 218.0 281 47.0
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.8e-37 160.2 144 63.9
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 9.0e-36 155.2 277 39.7
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 9.9e-35 151.8 146 60.3
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 5.5e-33 146.0 96 69.8
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.6e-32 144.4 302 32.1
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.2e-27 128.3 132 59.1
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 6.5e-26 122.5 117 55.6
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 8.7e-23 112.1 295 28.5
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 1.3e-21 108.2 66 84.8
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 1.3e-18 98.2 121 47.1
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 5.5e-17 92.8 299 22.7
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 4.3e-14 83.2 75 53.3
TAR636G3321 Trochodendron aralioides HOM05D007241 ORTHO05D009142 7.2e-09 65.9 59 61.0
TAR636G1005 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.0e-07 62.0 57 61.4
TAR636G2806 Trochodendron aralioides HOM05D000088 ORTHO05D029931 1.5e-06 58.2 35 82.9
FAN28G2275 Fragaria x ananassa HOM05D000356 ORTHO05D000265 7.4e-06 55.8 103 39.8


User provided reference genes

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