Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 3.2e-114 415.2 228 100.0
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.9e-103 379.4 230 91.7
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.6e-100 369.0 231 87.9
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.6e-100 369.0 231 87.9
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 5.8e-100 367.9 230 88.3
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.7e-99 366.3 230 89.6
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.1e-98 363.6 230 87.4
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 1.4e-98 363.2 230 87.4
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 6.0e-97 357.8 246 81.3
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 5.6e-95 351.3 229 87.3
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 5.6e-95 351.3 228 84.2
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.6e-94 349.7 235 84.3
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 4.8e-94 348.2 228 83.8
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 2.4e-93 345.9 230 83.5
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 4.0e-93 345.1 229 83.0
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 5.3e-93 344.7 233 83.3
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 7.6e-92 340.9 231 85.3
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 7.6e-92 340.9 230 82.6
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 7.6e-92 340.9 229 85.6
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 1.0e-91 340.5 231 80.5
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.0e-91 340.5 229 83.0
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 1.3e-91 340.1 228 84.2
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 1.7e-91 339.7 230 83.0
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 2.2e-91 339.3 231 79.7
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 2.9e-91 339.0 231 81.8
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 2.9e-91 339.0 230 82.2
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 3.8e-91 338.6 243 81.5
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 4.9e-91 338.2 230 82.2
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 4.9e-91 338.2 230 82.2
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 8.4e-91 337.4 228 80.3
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 1.4e-90 336.7 231 80.5
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 2.5e-90 335.9 229 82.5
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 3.2e-90 335.5 231 79.2
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 3.2e-90 335.5 231 81.0
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 5.5e-90 334.7 233 82.4
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 7.1e-90 334.3 230 83.0
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 9.3e-90 334.0 230 81.7
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 9.3e-90 334.0 230 82.2
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 1.2e-89 333.6 232 83.2
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 1.2e-89 333.6 229 83.4
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 2.1e-89 332.8 232 81.0
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 3.5e-89 332.0 232 79.3
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 3.5e-89 332.0 232 79.3
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 4.6e-89 331.6 231 81.0
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 4.6e-89 331.6 232 80.6
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 6.0e-89 331.3 230 83.9
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 6.0e-89 331.3 231 81.0
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 6.0e-89 331.3 231 80.1
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 7.9e-89 330.9 232 78.9
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 7.9e-89 330.9 232 78.9
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 7.9e-89 330.9 232 81.9
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 1.0e-88 330.5 231 81.8
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 1.3e-88 330.1 229 82.1
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 1.8e-88 329.7 233 82.4
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 1.8e-88 329.7 232 80.2
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 1.8e-88 329.7 228 80.3
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 2.3e-88 329.3 231 77.9
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 2.3e-88 329.3 232 78.4
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 2.3e-88 329.3 230 83.5
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.0e-88 328.9 233 81.5
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 3.9e-88 328.6 231 80.5
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 5.1e-88 328.2 233 78.1
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 5.1e-88 328.2 233 78.1
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 8.7e-88 327.4 230 78.7
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 8.7e-88 327.4 232 78.0
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 8.7e-88 327.4 231 78.4
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 3.3e-87 325.5 232 77.6
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 3.3e-87 325.5 232 77.6
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 3.3e-87 325.5 232 77.6
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 3.3e-87 325.5 231 77.1
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 3.3e-87 325.5 229 81.7
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 5.7e-87 324.7 230 78.7
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 1.3e-86 323.6 234 81.2
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 2.1e-86 322.8 228 78.9
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 2.1e-86 322.8 228 75.9
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 2.8e-86 322.4 232 77.2
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 2.8e-86 322.4 232 77.2
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 2.8e-86 322.4 230 82.2
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 2.8e-86 322.4 234 81.2
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 2.8e-86 322.4 231 79.7
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 6.2e-86 321.2 229 81.2
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.1e-85 320.5 235 77.4
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.4e-85 320.1 234 79.9
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 1.8e-85 319.7 233 80.3
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 2.4e-85 319.3 231 81.4
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 3.1e-85 318.9 232 76.7
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 4.0e-85 318.5 231 80.1
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 5.3e-85 318.2 233 79.8
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 5.3e-85 318.2 228 78.9
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 6.9e-85 317.8 234 79.5
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 1.2e-84 317.0 229 79.9
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.5e-84 316.6 284 64.8
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 2.0e-84 316.2 231 77.5
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 2.6e-84 315.8 228 74.1
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 2.6e-84 315.8 232 79.3
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.6e-84 315.8 228 79.8
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 5.8e-84 314.7 231 79.2
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 2.2e-83 312.8 232 75.4
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.9e-82 309.7 229 77.3
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 1.9e-82 309.7 231 80.1
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 3.2e-82 308.9 251 68.5
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 2.7e-81 305.8 230 74.8
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 7.9e-81 304.3 232 75.9
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 1.0e-80 303.9 230 77.0
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 5.1e-80 301.6 233 77.3
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 4.3e-79 298.5 230 75.7
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 7.4e-79 297.7 228 72.4
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 1.3e-78 297.0 230 77.0
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 1.3e-78 297.0 237 75.1
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.8e-78 295.8 231 71.9
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 6.3e-78 294.7 231 71.9
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 6.3e-78 294.7 225 77.3
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 4.1e-77 292.0 233 74.7
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 6.9e-77 291.2 231 74.5
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 3.4e-76 288.9 234 73.9
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 3.4e-76 288.9 234 73.9
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 4.5e-76 288.5 232 72.8
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 1.0e-75 287.3 228 68.9
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.8e-75 285.4 216 79.6
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 8.5e-75 284.3 232 71.6
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 1.1e-74 283.9 231 72.7
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.1e-74 283.9 228 69.3
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 1.9e-74 283.1 229 72.5
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 4.2e-74 282.0 232 72.4
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 7.2e-74 281.2 228 71.1
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.3e-72 276.2 228 71.5
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 3.0e-72 275.8 228 69.3
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.5e-71 273.5 228 71.1
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.4e-71 271.2 228 70.6
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.3e-70 270.4 228 70.2
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.4e-69 266.9 271 61.3
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 3.1e-69 265.8 232 70.3
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 5.3e-69 265.0 229 69.9
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 1.2e-68 263.8 229 69.9
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 2.9e-67 259.2 228 69.3
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 1.4e-66 256.9 230 67.0
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.7e-65 252.7 233 68.7
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 6.7e-64 248.1 185 78.4
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 3.5e-60 235.7 160 85.6
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 5.9e-60 235.0 187 73.3
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.4e-58 227.6 187 73.3
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 1.6e-57 226.9 237 62.0
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.5e-55 220.3 231 62.8
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 5.3e-53 211.8 154 82.5
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 4.5e-52 208.8 121 86.8
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 5.9e-52 208.4 254 52.4
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 3.6e-49 199.1 233 56.2
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.7e-49 198.7 122 81.1
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 2.3e-48 196.4 121 82.6
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 1.2e-44 184.1 238 51.7
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.2e-44 184.1 113 85.0
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.6e-44 183.7 113 84.1
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-43 180.3 113 83.2
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 4.7e-41 172.2 122 77.0
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 4.4e-39 165.6 155 67.1
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 9.8e-39 164.5 96 88.5
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 5.4e-37 158.7 93 87.1
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 3.8e-35 152.5 136 70.6
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 2.1e-33 146.7 97 77.3
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 1.2e-31 141.0 81 87.7
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 4.1e-29 132.5 76 85.5
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 5.9e-28 128.6 178 52.2
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 3.3e-26 122.9 89 71.9
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 2.8e-25 119.8 228 41.2
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 1.4e-24 117.5 76 78.9
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 8.9e-24 114.8 96 65.6
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.2e-23 114.4 176 44.3
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 3.4e-23 112.8 97 63.9
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.8e-23 112.1 74 83.8
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 3.7e-22 109.4 225 39.1
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.2e-16 89.0 44 95.5
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 2.6e-15 86.7 57 73.7
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 2.6e-15 86.7 71 63.4
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 3.9e-11 72.8 94 48.9
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.1e-11 72.4 93 51.6
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 5.1e-11 72.4 120 36.7
Zm00001eb225910 Zea mays HOM05D003885 ORTHO05D444501 1.5e-07 60.8 48 66.7


User provided reference genes

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