Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 1.1e-72 276.6 136 100.0
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 3.2e-21 105.5 53 92.5
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 3.0e-19 99.0 58 81.0
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 6.7e-19 97.8 54 85.2
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 1.9e-18 96.3 51 84.3
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 3.3e-18 95.5 52 82.7
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 1.7e-17 93.2 47 89.4
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 1.7e-17 93.2 46 93.5
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 2.2e-17 92.8 46 87.0
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 2.8e-17 92.4 46 91.3
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 2.8e-17 92.4 47 87.2
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 3.7e-17 92.0 47 87.2
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 3.7e-17 92.0 46 91.3
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 89.1
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 89.1
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 91.3
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 89.1
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 91.3
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 91.3
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 91.3
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 89.1
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 4.8e-17 91.7 52 78.8
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 4.8e-17 91.7 50 82.0
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 4.8e-17 91.7 46 91.3
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 6.3e-17 91.3 46 89.1
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 6.3e-17 91.3 46 89.1
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 6.3e-17 91.3 46 89.1
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 6.3e-17 91.3 46 89.1
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 6.3e-17 91.3 47 85.1
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 6.3e-17 91.3 46 89.1
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 8.2e-17 90.9 46 84.8
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 8.2e-17 90.9 46 84.8
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 8.2e-17 90.9 46 91.3
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 8.2e-17 90.9 46 89.1
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 8.2e-17 90.9 46 87.0
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 1.1e-16 90.5 46 87.0
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 1.1e-16 90.5 46 87.0
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.4e-16 90.1 47 85.1
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 1.4e-16 90.1 46 87.0
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.8e-16 89.7 47 85.1
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 1.8e-16 89.7 47 87.2
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 1.8e-16 89.7 47 85.1
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 2.4e-16 89.4 46 89.1
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 2.4e-16 89.4 46 87.0
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 2.4e-16 89.4 46 87.0
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.4e-16 89.4 46 87.0
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.4e-16 89.4 46 87.0
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.1e-16 89.0 46 87.0
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 4.1e-16 88.6 46 87.0
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 4.1e-16 88.6 50 78.0
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 4.1e-16 88.6 46 84.8
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 4.1e-16 88.6 46 84.8
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 4.1e-16 88.6 46 91.3
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 89.1
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 89.1
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 84.8
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 84.8
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 84.8
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 84.8
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 89.1
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 5.3e-16 88.2 47 89.4
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 5.3e-16 88.2 47 89.4
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 5.3e-16 88.2 47 89.4
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 5.3e-16 88.2 46 91.3
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 6.9e-16 87.8 46 87.0
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 6.9e-16 87.8 47 80.9
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 6.9e-16 87.8 46 87.0
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 6.9e-16 87.8 46 82.6
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 6.9e-16 87.8 47 85.1
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 6.9e-16 87.8 46 84.8
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 9.1e-16 87.4 46 84.8
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 9.1e-16 87.4 46 84.8
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 9.1e-16 87.4 46 84.8
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 9.1e-16 87.4 46 84.8
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 9.1e-16 87.4 47 87.2
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 1.5e-15 86.7 46 82.6
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 1.5e-15 86.7 47 85.1
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 1.5e-15 86.7 46 82.6
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 1.5e-15 86.7 46 84.8
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 2.0e-15 86.3 46 84.8
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 3.4e-15 85.5 46 84.8
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 4.5e-15 85.1 46 80.4
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 5.9e-15 84.7 46 87.0
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 7.7e-15 84.3 46 84.8
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 1.0e-14 84.0 46 82.6
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 1.0e-14 84.0 46 82.6
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 1.3e-14 83.6 46 80.4
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 5.0e-14 81.6 46 80.4
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 8.5e-14 80.9 49 75.5
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.5e-13 79.3 45 84.4
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 2.5e-13 79.3 47 83.0
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 7.2e-13 77.8 46 69.6
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 2.1e-12 76.3 46 80.4
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 8.8e-11 70.9 36 86.1
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 1.5e-10 70.1 47 61.7
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 3.3e-10 68.9 35 85.7
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 3.3e-10 68.9 35 88.6
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 4.4e-10 68.6 37 78.4
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 4.4e-10 68.6 35 85.7
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 5.7e-10 68.2 40 72.5
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 9.7e-10 67.4 35 82.9
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 1.3e-09 67.0 46 65.2
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 1.3e-09 67.0 34 88.2
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 2.8e-09 65.9 34 88.2
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 3.7e-09 65.5 45 71.1
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 4.8e-09 65.1 46 60.9
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-08 63.9 59 57.6
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-08 63.9 59 57.6
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 1.8e-08 63.2 34 76.5
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 2.4e-08 62.8 34 85.3
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 2.4e-08 62.8 35 80.0
Aqoxy1G02677 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 7.0e-08 61.2 40 72.5
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 7.0e-08 61.2 34 85.3
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 9.1e-08 60.8 56 53.6
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 2.0e-07 59.7 47 57.4
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.6e-07 59.3 52 61.5
Haze_03646 Corylus avellana HOM05D000045 ORTHO05D011917 1.3e-06 57.0 35 82.9


User provided reference genes

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